Acidovorax ebreus: Dtpsy_1636
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Entry
Dtpsy_1636 CDS
T00853
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
dia
Acidovorax ebreus
Pathway
dia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dtpsy_1636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dia03400
]
Dtpsy_1636
DNA repair and recombination proteins [BR:
dia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dtpsy_1636
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dtpsy_1636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
Kinesin
UB2H
P-loop_SecA
Orbi_NS3
Motif
Other DBs
NCBI-ProteinID:
ACM33094
UniProt:
A0A9J9Q6J9
LinkDB
All DBs
Position
1727364..1729460
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AA seq
698 aa
AA seq
DB search
MHEVTSEPAAGAADGQFVQFPGSPFSLYQPYPPAGDQPEAIAKLVEGVQDGEVFQTLLGV
TGSGKTFTMANVIARLGRPAIIFAPNKTLAAQLYSEFREFFPKNAVEYFVSYYDYYQPEA
YVPQRDLFIEKDSAINEHIEQMRLSCTKSLLERRDVVIVATVSAIYGIGEPESYHRMIMT
LRVGDQLSQRDAIAQLIRMQYQRNEQDFSRGKFRVRGDTIDVFPAEHSELAVRIELFDDE
VESLQLFDPLTGRIQQKIPRFTVYPSSHYVTPRDKVLAAVETIKQELDERLKFFVAEGKL
VEAQRLEQRTRFDLEMLSEVGHCKGIENYTRHLSGSAPGEPPSTLTDYLPPDALMFLDES
HQMIGQLNAMYNGDRARKTTLVEYGFRLPSALDNRPLKFEEFEQRMRQVVFVSATPADYE
KEHSGQVVDQVVRPTGLVDPEVEVRPATHQVDDVLQEIRICTQKNQRVLITTLTKRMAEQ
LTDYLSDNGVKVRYLHSDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRAERSLIQTIGRAARNLHGKAILYADRITDSMRKAISETERRRAKQIAYNEA
RGITPRSIVKQVRDLIDGVYSEKAGQEAQRLREDAARQAELEEMSEKDIAREIKRLEKLM
LEHARNLEFEQAARVRDQLTRLKDRVFGAHGGDQIPAA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtcacctctgagccggccgctggcgcggcggacgggcagttcgtccagttt
ccaggttcgcccttttcgttgtaccagccatacccgcccgccggcgaccagcccgaggcc
atcgccaagctggtggagggcgtgcaggacggcgaggtgttccagaccctgctgggggtg
acgggctcgggcaagaccttcaccatggcgaacgtgatcgcccgcctgggacggccggcc
atcatcttcgcgcccaacaagacgctggccgcacagctgtacagcgagttccgcgagttc
ttccccaagaacgccgtggagtacttcgtgagctattacgactactaccagcccgaggcc
tacgtgcctcagcgcgacctgttcatcgagaaggacagcgccatcaacgagcacatcgag
cagatgcgcctgtcgtgcaccaagagcttgctggagcggcgcgatgtggtcatcgtggct
acggtgtcggccatctacggcattggcgagcccgagagctaccaccgcatgatcatgacg
ctgcgcgtgggtgaccagctgagccagcgtgacgcgatcgcgcagctgatccgcatgcag
taccagcgcaacgagcaggacttcagccggggcaagttccgcgtgcgtggcgacaccatc
gatgtgttcccagccgagcattccgagctggcggtgcgcatcgaactgttcgacgacgag
gtggaaagcctgcagctgttcgacccgctcacggggcgtatccagcaaaaaatcccgcgc
ttcacggtgtaccccagcagccattacgtgacgccgcgcgacaaggtgctggcggccgtg
gagaccatcaagcaggaactggacgagcggctcaagttcttcgtggccgagggcaagttg
gtggaggcgcaacggctggagcagcgcacgcgcttcgacctggaaatgctcagcgaagtg
gggcactgcaagggcatcgagaactacacgcgccacctgtcgggttctgcgcctggcgag
ccgccgagcacgctgaccgactacctcccgcccgatgcgctgatgttcctggatgagagc
caccagatgatcgggcaactcaacgccatgtacaacggcgaccgcgcgcgtaagaccacg
ctggtcgagtacggctttcgcctgccgtcggcattggacaaccggccgctcaagttcgag
gagttcgagcagcgcatgcggcaggtggtgtttgtatcggccactccggctgattatgag
aaggagcactcgggccaggtggtggaccaggtggtacggcccaccggcttggtggacccg
gaggtggaggtgcgtcccgctacccatcaggtggatgatgtgctgcaagaaatacgcatt
tgcacgcaaaagaatcaacgcgtactcattacgacgctgacgaagcgcatggcggagcaa
ctgaccgattacctgagcgacaacggggtcaaggtgcgctatctgcactccgatatcgac
actgtggagcgcgtggaaatcattcgcgacctgcgcctgggagccttcgatgtcctggtg
gggatcaacctgctgcgtgaggggctggacattcctgaggtctccctggtggccatcctg
gatgccgacaaggagggtttcctgcgcgccgaacgcagcctgatccagaccatcggccgg
gcggcgcgcaacctgcacggcaaggccatcctgtatgccgaccggatcaccgactcaatg
cgcaaggcgatcagcgaaacggaacgccgccgcgccaaacagatcgcatacaacgaggcc
cggggtattacgccgcgcagcatcgtcaagcaggtgcgagacctgattgacggcgtgtac
agcgagaaggcaggccaggaagcccagcgactccgcgaagacgcggcgcggcaggccgaa
ctggaggagatgtccgaaaaggacattgcgcgcgaaatcaagcggctggaaaagctcatg
ctggaacacgcccgcaacctggagtttgagcaggctgctcgggtgcgcgatcaattgacc
cgtctcaaggaccgggtgttcggagcgcatggcggcgatcaaatccctgccgcatga
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