Acidovorax ebreus: Dtpsy_2964
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Entry
Dtpsy_2964 CDS
T00853
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dia
Acidovorax ebreus
Brite
KEGG Orthology (KO) [BR:
dia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dia03016
]
Dtpsy_2964
Enzymes [BR:
dia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Dtpsy_2964
Transfer RNA biogenesis [BR:
dia03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Dtpsy_2964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Myosin_N
Motif
Other DBs
NCBI-ProteinID:
ACM34397
UniProt:
A0A9J9Q914
LinkDB
All DBs
Position
3153072..3155243
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AA seq
723 aa
AA seq
DB search
MHALFDEAGKFLAGRILSEAESSAQIELDSGKRVKVKAANILLKFDKPAPAELLAQAREI
AAGVELPLAWEFAPEEEFGFAELARDYFSAQAPVTEQAGMLVALFEAPHYFRRAGKGRFR
KASAEVLQQALAAIEKKKQIQAQIDAWAAELVAGTCPQPVREQLYKILFRPDKNAPEYKA
VVEASRSAQKAPLDLLQAAGAIDSSYQFHWKRFLFDNFPKGTGFPPLAAPQPPADLPLAD
VQAYSIDDSATTEIDDALSVQGLGTGTVTLGIHIAAPGLAIQPGGDLDKLGRTRLSTVYM
PGYKITMLPDEVVQIYTLDEGRANPAVSLYVTIDEATLAITATETRLERVPVTVNLRHDQ
LDHIVTEEWLQDASIQTENTPQALLDLREQLSFLHRLAKQLKAQREVVRGKPETFNRPDY
TFRLSAARPPEGANAPAGGSAGSEAASMGAHKPRNDGAEPDGSEQVHIGTRKRGAPLDLI
VAEAAIVANSTWGNMLAEHGVPGIYRSQASLAPGVKVRMSTKALPHAGIGVKSYAWATSP
LRRYVDLVNQWQIIACARHGKTAALAAPFKPKDAELFSIISSFDAAYSAYNGYQAGMERF
WTLKYLQQNQITELDATVFKEGPNGSFLVRADTLPLVLPVLGAQQLPRGARVRVKLGEID
EITLDVAGTLVARLDDPLDASDDGPVDEDEGDEEAVAGPIAIAVDVNEAEGEGAGGTADN
RAP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcactgttcgacgaagccggcaagttcctggccggccgcatcctctccgaagcc
gaaagctcggcacagattgagctcgactcgggtaaacgcgtcaaggtcaaggccgccaac
atcctgttgaagttcgacaagcccgccccggccgagctgctggcgcaggcgcgcgagatc
gccgccggcgtggagcttccgctggcctgggagttcgcgcccgaggaggagttcggcttc
gccgagttggcgcgcgactatttttctgcccaggcgccagtgaccgagcaagccggcatg
ctggtggcgctgttcgaggcgccgcactactttcgccgcgcgggcaaggggcgttttcgc
aaggcgtcggccgaggtgctgcagcaggccctcgccgccatcgagaagaagaagcagatc
caggcgcagatcgacgcctgggccgccgaactcgtcgccggcacctgcccgcagcccgtg
cgcgagcagctctacaaaattctgttccgccccgacaagaacgcgcccgagtacaaggcc
gtggtcgaggccagccgcagcgcgcagaaggctccgttggacctgttgcaggccgcgggt
gcgatcgactccagctaccagttccactggaagcggtttttgttcgacaacttccccaag
ggcacgggctttcccccgctggcggcaccccagccgccggccgacctgccgctggcggat
gtacaggcctattccatcgacgattcggccaccaccgagatcgacgacgccctgtcggta
cagggcctgggcaccggcaccgtgacgctgggcatccacattgcagcgccgggcctggcg
atccaacccgggggcgacctggacaagctggggcgcacgcgcctgtccaccgtctacatg
ccgggctacaagatcaccatgctgcctgacgaggtggtgcagatctacacgctggacgag
gggcgcgccaacccggctgtgtcgctgtatgtgacgatcgacgaggccacgctggccatc
accgccaccgagacgcgcctggagcgcgtgcccgtgacggtgaatctgcgccacgaccag
ctcgaccacatcgtcaccgaagaatggctgcaggatgcgtcgattcagaccgaaaatacg
cctcaggccttgctggatctgcgtgagcagctctcctttttgcaccgactggccaagcag
ctcaaggcccagcgcgaagtcgtgcgcggcaagcccgaaaccttcaaccgccccgactac
accttccggctgagcgccgcccggccgcccgaaggcgcgaacgcccccgcggggggcagc
gcaggcagcgaagcggcaagcatgggggcccacaagccccgcaacgacggcgccgagccc
gatggcagcgaacaggtgcacatcggcacccgcaagcgcggcgcgccgctggacctgatc
gtggccgaggccgccatcgtcgccaacagcacctggggcaacatgctggccgagcacggc
gtgccgggcatctaccgcagccaggccagcctggcgccgggggtcaaggtgcgcatgtcc
acgaaggcgctgccgcacgccggcatcggcgtgaagagctacgcctgggccacctcgccg
ctgcgccgctacgtggacctggtgaaccagtggcagatcattgcctgcgcgcgccacggc
aagaccgctgcactggccgcaccgttcaagcccaaggacgcggagctgttctccatcatc
agcagcttcgatgccgcctacagcgcctacaacggctaccaggccggcatggagcgcttc
tggacgctcaagtacctgcagcagaaccagatcaccgagctggacgccaccgtgttcaag
gaagggccaaacggtagcttcctggtgcgcgccgacaccctgccactggtgctgcccgtg
ctgggcgcgcagcagctgccgcgcggcgcacgcgtgcgcgtcaagctcggcgagatcgac
gagatcacgctggacgtggcgggcaccctggtggcgcgcctggacgacccgctggatgcc
agcgacgacggcccggtggacgaggacgagggcgacgaggaggccgtggccggcccgatc
gccatcgcggtcgatgtcaacgaggccgagggcgagggcgccggcggcaccgctgataat
cgggcgccgtga
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