Dickeya poaceiphila: Dpoa569_0000009
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Entry
Dpoa569_0000009 CDS
T06188
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dic03016
]
Dpoa569_0000009 (rnz)
Enzymes [BR:
dic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Dpoa569_0000009 (rnz)
Transfer RNA biogenesis [BR:
dic03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Dpoa569_0000009 (rnz)
Prokaryotic type
Dpoa569_0000009 (rnz)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QDX31857
UniProt:
A0A5B8IKT3
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All DBs
Position
complement(11514..12428)
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AA seq
304 aa
AA seq
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MELIFLGTSAGVPTKERNSTSIALDLHGIRPAFWLFDCGEGTQHQILRTSIKPGKLEKIF
ITHLHGDHLFGLPGLLCSRSMAGIETPLTLYGPTGLNAFVEATLTLSGSWLTYPLEVVEI
VPGTVFEDHQLRVTAHELSHTLYCLGYRIEERPRPGPLDVEKLAAEGVKPGAYFQQLKRG
ETVTLDDGRVLNGWDYVGPDLPGKSLAIFGDTRPTPEALKLAAGVDVMVHEATVEGAMAE
RADERGHSTTLQTAATARDAGAKRLIITHFSARYGQTDLERLRQECMTLFPATEVATDFA
TFRV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatttttctcggcaccagcgcgggcgtgcccactaaagagcgtaactccacc
agtatcgcgctcgacttgcacggtattcgcccggcgttctggttgtttgattgtggtgaa
ggcacccagcaccagattttgcgcacctcgatcaaacccggcaagctggagaaaattttt
atcacccatctgcacggcgatcatttgttcgggttgcccggtttactgtgttctcgctca
atggcgggtattgaaacaccgctgacgctctatggcccgacgggactcaacgctttcgtc
gaagccacgcttacgctgagcggctcctggctcacttatccactggaggtggtggaaatc
gttcccggtacagtgtttgaagaccatcagttacgggtgacggcgcatgagctgtctcat
acgctgtattgcctgggataccggattgaggaacgccccaggccgggtccactggatgtg
gaaaaactggcggcggagggcgtcaaacccggtgcctattttcagcagttgaaacgcggt
gaaacggtaacccttgatgacgggcgggtactgaacggctgggattacgttggccctgac
ctgccaggcaaatcgctggctattttcggtgatacccgtccgacgccggaagcgcttaag
ctggccgctggcgtcgatgttatggtgcacgaagccacagtggaaggggcgatggcggag
cgcgccgatgagcgcggacactccaccaccttgcaaactgccgctaccgcgcgggatgcc
ggcgccaaacggctaattatcacccatttcagcgcccgctacggccagacagacctggaa
cggttgcgtcaggagtgtatgacactatttccggcaaccgaagtcgccaccgattttgcc
acttttcgggtatag
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