Dickeya poaceiphila: Dpoa569_0000277
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Entry
Dpoa569_0000277 CDS
T06188
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
dic
Dickeya poaceiphila
Pathway
dic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dpoa569_0000277 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dic03021
]
Dpoa569_0000277 (rho)
03019 Messenger RNA biogenesis [BR:
dic03019
]
Dpoa569_0000277 (rho)
Transcription machinery [BR:
dic03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Dpoa569_0000277 (rho)
Messenger RNA biogenesis [BR:
dic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Dpoa569_0000277 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
QDX28618
UniProt:
A0A5B8I0Y0
LinkDB
All DBs
Position
318916..320175
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaaaaatacgccagtatctgagttgattactcttggcgagaat
atggggctggagaatctggctcgtatgcgtaaacaggatattattttcgctatccttaag
cagcacgcaaaaagtggtgaagacatctttggcgatggcgtactggaaatattgcaggat
ggttttggtttcctccgttccgcagacagttcctacctcgccggccctgatgatatctac
gtttcccctagccaaatccgacgcttcaacctccgcactggcgatactatttccggtaag
attcgtcctccgaaagagggtgagcgctattttgcactgctgaaggtcaacgaagtcaac
tacgacaaaccggaaaatgcccgtagcaaaatcctgtttgaaaacctgacgccgctacat
gctaattcgcgtctgcgtatggagcgcggtaacggctctactgaagacctgacggctcgt
gtgctggatctggctgcgccgattggtcgtggacagcgtggtttgatcgtggcaccgccg
aaagccggtaaaaccatgttgctgcaaaatatcgctcaaagcatcgcttacaaccatcct
gattgtgtattgatggtgctgctgattgacgaacgtccggaagaagtgacggaaatgcag
cgtttggtgaaaggggaagtggtggcgtcaacctttgacgaaccggcttctcgccatgtt
caggttgccgaaatggtgatcgagaaagccaaacgtctggttgagcacaagaaggacgtc
attatcctgctggactctatcactcgtctggcgcgtgcttacaacaccgtggtaccggcg
tccggcaaggtgctgaccgggggggttgacgctaacgccctgcatcgtccgaagcgtttc
ttcggtgcggcccgtaacgtcgaagaaggcggcagcctgactatcatcgccactgcgctt
attgataccggttcgaagatggacgaagtgatttacgaagagttcaagggcaccggtaat
atggaattgcacctgtctcgtaagattgcagagaaacgagtgttcccagccatcgactac
aatcgttctggtactcgtaaggaagagctgttgaccacgtctgaagagctgcagaagatg
tggattctgcgcaagatcatccatccgatgggcgagatcgatgcgatggagttccttatc
aacaagctggcgatgaccaaaaccaacgacgagttcttcgatatgatgaaacgctcctaa
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