Dickeya poaceiphila: Dpoa569_0000451
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Entry
Dpoa569_0000451 CDS
T06188
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dic03009
]
Dpoa569_0000451 (rsmB)
Enzymes [BR:
dic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Dpoa569_0000451 (rsmB)
Ribosome biogenesis [BR:
dic03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dpoa569_0000451 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
Methyltransf_37
MTS
FtsJ
Methyltransf_5
Methyltr_RsmF_N
Methyltransf_12
Methyltransf_11
Methyltransf_15
Methyltransf_4
Cons_hypoth95
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
QDX28777
UniProt:
A0A5B8I680
LinkDB
All DBs
Position
complement(488996..490291)
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AA seq
431 aa
AA seq
DB search
MKSTYNLRSIAATTLVQVVEQGQSLSQLLPALQRDVSEKDRSLLQEICFGVLRVLPQLDW
YLTQLMVKPLTGKQKVLHYLLMVGLYQLIHTRIPPHAALAETVNGAVALKRPQLKGLING
VLRQFQRQQEELRQRLQNNPARYAHPNWLLQRLKKAYPDQWEQIISANNQHPPMWLRVNR
LHHTREAYLGLLQGKGIDAHPHPFYPDAIRLSQPCAVTLLPGFDQGWVTVQDASAQGCIH
WLSPQDHENILDLCAAPGGKTTHILEAAPHAHVLAIDIDEQRLKRVRENLQRLGLHAEVK
CGDGRTPAEWCEDQYFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELASLQQAILDAI
WPRLKSGGTLIYATCSVLPEENHQQVAAFLQRHSNAMLVDTGNQVSPGIQKFPAAEDGDG
FFYAKLVKNGR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcacatataatcttcgcagcattgccgccaccactcttgttcaggttgtagaa
caaggacaatcacttagccagctgctgccagcactccagcgcgatgtcagtgagaaagat
cgcagcttgttgcaggagatctgcttcggcgtattgcgcgtactaccacagctggattgg
tatctcactcaactgatggtcaaaccgcttaccggcaagcagaaggtactgcattatctg
ttgatggtgggtctctatcagctcattcatacccggattcccccacatgctgcgctggca
gaaacagttaatggcgcagttgctctgaaacgtccccaattaaagggcttaattaacggc
gtattacgccagtttcaacgtcaacaggaagagctgcggcaacgtttacaaaataatccc
gcacgttatgctcaccccaactggctgctgcaacggctaaaaaaagcctatccagaccag
tgggaacaaattatcagcgcaaacaaccaacatcccccgatgtggttaagggttaatcgc
cttcaccatacccgtgaagcctatctgggtttactacagggaaaaggaattgacgcccat
cctcacccgttctatccggatgccatcagactgagccaaccttgtgctgttactttgtta
ccgggatttgatcaaggttgggtgacggtgcaggatgcatcagcacaaggctgtatccac
tggttgtcaccgcaagatcatgaaaatattctcgatctctgtgcggcacccggcggaaaa
acaacacatatacttgaagcagcccctcatgctcatgtacttgctatcgatattgatgaa
cagcgtctgaaacgagtcagagaaaatttgcaacgccttgggctacacgccgaggtcaaa
tgcggtgatggcagaacaccggcagaatggtgcgaagaccagtactttgatcgcatttta
cttgatgcgccttgctctgctaccggtgtgattcgtcgccatccagacatcaaatggttg
cgccgcgatagtgacattgccgaattggcgtcactacaacaggcgatactggacgctatc
tggccccggctgaaaagcggcggaacgttgatttacgccacctgctcggtattgccggaa
gaaaatcaccaacaggttgctgcttttttgcaacgccactccaacgcaatgttggtcgat
accggtaaccaagtatcaccaggaattcagaagtttcccgcagcagaagacggcgatggt
ttcttctatgcgaagctggtaaaaaacgggcgatag
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