Dickeya poaceiphila: Dpoa569_0000578
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Entry
Dpoa569_0000578 CDS
T06188
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00220
Arginine biosynthesis
dic00240
Pyrimidine metabolism
dic00250
Alanine, aspartate and glutamate metabolism
dic01100
Metabolic pathways
dic01110
Biosynthesis of secondary metabolites
dic01240
Biosynthesis of cofactors
Module
dic_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Dpoa569_0000578 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Dpoa569_0000578 (carB)
00220 Arginine biosynthesis
Dpoa569_0000578 (carB)
Enzymes [BR:
dic01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Dpoa569_0000578 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
QDX28891
UniProt:
A0A5B8I2A7
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All DBs
Position
640973..644197
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLAEFGVTMIGATA
DAIDKAEDRRRFDIAMKKIGLETARSGIAHSMEEALAVAAVVGYPCIIRPSFTMGGTGGG
IAYNREEFEEICTRGLDLSPTRELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENLDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESLQKALRGLEVGATGFDPKVDLDDPQA
LTKIRRELKDAGGDRIWYLADAFRAGMSVDGVFNLTNIDRWFLVQIEELVRLEEQVVEQG
ANSLTPEFLRLLKRKGFADARLAKLAGVSESEIRKLRYKYNLHPVYKRVDTCAAEFATDT
AYMYSTYDEECEANPNQDRDKIMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLARQLEAAGVP
VIGTSPDAIDRAEDRERFQQAVNRLGLKQPANATVSTIEQAVEKAVSIGYPLVVRPSYVL
GGRAMEIVYDEADLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSKEIQDVMRQQVEKLAFELSVRGLMNVQFAVKNNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMVGQTLAQQGVTEEVIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFAKAMLGSNSPMKKTGRALLSVREGDKARVVDL
AAKLLKHGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTMNGGFATAMSLNADPTEQVISVQEMHTRIRG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagacataaaaagtatcctgattctcggtgctggtccgattgtgatc
ggtcaggcgtgcgagtttgactactccggcgctcaggcgtgtaaggcgctgcgtgaagaa
ggctaccgcgtgattctggtgaactccaacccggccaccatcatgaccgatccggagatg
gccgacgccacctatattgaaccgatccactgggaagtggtgcgtaagatcatcgaaaaa
gaacgcccggatgcggtactgccgaccatgggcggccagacggcgttgaactgcgcgctg
gagctggaacggcagggggtgctggcggaatttggcgtgaccatgatcggcgcgaccgcc
gatgccatcgataaggcggaagatcgtcgtcgcttcgacattgcgatgaagaaaatcggc
ctggaaaccgctcgttccggcattgcgcacagcatggaagaagcgctggcggtggcggcg
gttgtgggttatccctgcatcatccgtccctcctttaccatgggcggcaccggcggcggc
atcgcttacaaccgtgaagagtttgaagaaatttgtacccgcggtctggatctgtcgccg
accagggaactgctgatcgatgaatcattgatcggttggaaagagtatgaaatggaagtg
gtgcgggataaaaacgacaactgcatcatcgtctgctccatcgagaaccttgatgccatg
gggattcacaccggtgactccatcactgtagcacccgcgcaaactctgaccgacaaggaa
tatcagatcatgcgtaacgcctcaatggcggtactgcgtgaaattggggtagaaaccggt
ggttccaacgtgcagttcgcggtcaacccgaaaacgggtcgcctgatcgtcatcgaaatg
aacccgcgtgtgtcccgttcgtcggcgctggcttctaaagcaactggtttcccgattgcc
aagatcgctgccaaactggcggttggttatacgctcgatgagctgatgaacgacattacc
ggtggccgtaccccggcgtcgttcgaaccgtccatcgactatgtggttaccaagatcccg
cgtttcaacttcgaaaaattcgccggcgccaatgatcgcctgacgacacaaatgaagtcg
gtgggtgaagtgatggcgattggccgcacccaacaggaatcattgcagaaagcgctgcgt
ggtctggaagtgggcgctaccggtttcgatcccaaagtagatcttgacgatccgcaagcg
ctgaccaaaattcgccgcgaactgaaagacgccggcggcgaccgtatctggtatctggcc
gatgcgtttcgtgccgggatgtcggttgacggcgtgttcaacctgaccaacattgaccgt
tggttcctggtgcaaattgaagagctggtgcgtctggaagagcaggtagttgagcagggc
gccaatagtctgacgcctgagttcctgcgtctgctgaaacgcaaaggttttgccgatgcc
cgtctggcgaagctggctggcgtgtctgaaagcgaaattcgcaagttgcgttacaaatat
aacctgcacccggtctacaagcgcgttgacacgtgtgctgccgagttcgctaccgatacc
gcctatatgtactctacctatgacgaggagtgcgaggctaacccgaatcaggaccgtgat
aaaatcatggtgctgggcggcggtccgaaccgtatcggccagggcattgagttcgactat
tgttgtgtgcacgcggcgctggcgctgcgtgaagatggttatgaaaccatcatggtcaac
tgtaacccggaaaccgtctccaccgattacgacacctctgatcgtctctactttgagccg
gtaacgctggaagacgtgctggaaatcgtgcgcattgagcagccgaaaggcgttatcgtg
cagtacggcggacagactccgctgaagctggcgcgtcagcttgaagcggctggcgtaccg
gtgatcggcaccagtccggatgccatcgaccgtgcggaagaccgtgagcgtttccagcag
gcggtcaatcgtcttggcctgaaacagcctgccaacgccactgtcagcaccatcgagcag
gcggtggaaaaagcggtcagcatcggttatccgctggtggtacgcccgtcttacgtgctg
ggtggccgggcgatggaaatcgtttacgacgaagccgatttgcgccgttacttccagact
gcggtcagcgtttctaacgatgcgccagtgctgctggaccgtttccttgacgatgccgtg
gaagtggatgtggatgcaatctgcgacggcgagcgcgtgctgattggcggcatcatggag
catattgagcaggctggcgtgcactccggcgactccgcctgttcgctgccggcctacacc
ctgagcaaagagattcaggacgtgatgcgtcaacaagtggaaaaactggcgttcgagctt
tccgtgcgtggcctgatgaatgtgcagttcgccgtgaaaaacaacgaagtgtacctgatt
gaggttaacccgcgtgcggcgcgtactgtgccgtttgtctccaaggcgactggcgtgccg
ttggcgaaagtggcggcccgcgtgatggtcgggcaaacgctggcccagcagggggttacc
gaagaggtgatcccgccgtactattccgtcaaggaagtggtgctgccgttcaataaattc
ccaggcgtagaccccattcttgggccggaaatgcgttctaccggcgaagtgatgggcgtg
ggccgtacctttgctgaagcttttgctaaagcgatgctgggcagcaattcgccgatgaag
aaaaccggtcgtgcattgctgtcggtgcgtgaaggtgataaagcgcgtgtggtggatttg
gcagccaaactgctcaaacacggttttgaactggacgcgacccacggcaccgctgtggtg
ctgggtgaagccggtatcaacccgcggctggtgaacaaggtgcatgaaggccgtccacac
attcaggatcgcatcaagaatggcgagtacacctacatcgtcaacaccacggcgggtcgt
caggcgattgaagactccaaactgattcgccgcagtgcattgcaatataaagtgcattac
gacaccaccatgaacggcggttttgctacggcgatgtcgctaaacgccgacccaaccgag
caggtgatttccgttcaggaaatgcatacccgtattcgtggctaa
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