Dickeya poaceiphila: Dpoa569_0000863
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Entry
Dpoa569_0000863 CDS
T06188
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dic
Dickeya poaceiphila
Pathway
dic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dpoa569_0000863 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dic03019
]
Dpoa569_0000863 (pcnB)
Enzymes [BR:
dic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dpoa569_0000863 (pcnB)
Messenger RNA biogenesis [BR:
dic03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dpoa569_0000863 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
HD
Motif
Other DBs
NCBI-ProteinID:
QDX29143
UniProt:
A0A5B8I3A8
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All DBs
Position
complement(963998..965401)
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AA seq
467 aa
AA seq
DB search
MFTRVANFCRKVLNRENEPARADNPPQAMTVIPRDQHAISRSDMSENALKVLYRLSKAGY
EAYLVGGGVRDLLLGKKPKDFDITTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEVIEV
ATFRGHHEQHQEQETKNAAQQGHNGMLLRDNIFGTIEEDAQRRDFTINSLYYSIADFTVR
DYTNGLHDLRQGLIRLIGDPETRYREDPVRMLRAVRFAAKLGMHISPETAEPIPRLASLL
HDIPPARLFEESLKLLQAGHGYPTYQLLCEYQLFQPLFPLISRYFTANRESTMERMIVQV
LKNTDQRIQNDMRVNPAFLFSAMLWYPLVEHAQKLTQESGLAYFEAFALAMNDVLDEQCR
SLAIPKRITSLVRDIWQLQLRLSRRQGKRAFKLMEHPKFRAAYDLLCLRAETENHQELQR
LAQWWGEFQVAAPPRQQAMLNTLDDGPTPHRRSRRPRKRPIHRDNAR
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atctttacccgggtagctaatttttgccgcaaggtactgaatcgtgagaatgagccagcc
agggcggacaatccgccgcaagcgatgacggtcattccccgtgaccaacatgccatttca
cgcagcgacatgagtgagaatgcgctgaaagtactgtatcgcctgagcaaagcgggctat
gaggcttatctggtaggcggcggcgtccgcgacctactgttgggcaaaaagcccaaagac
ttcgatattaccaccaacgccacgccggagcaggttcgcaagttattccgcaattgccga
ctggtgggccgccgttttcgtctggcgcatgtcatgttcggccctgaggtgattgaagtc
gccacattccgtggtcaccacgagcagcatcaggaacaggaaaccaaaaatgccgcccag
caaggccacaacggtatgctgctgcgcgataacattttcggcactattgaagaagatgcg
cagcggcgcgacttcaccatcaacagcctctattacagcattgccgactttaccgtacgt
gactataccaatggtctgcatgatctgcgtcagggattgattcgcctgattggcgacccg
gaaacccgctaccgcgaagatccggttcgtatgctgcgcgccgtgcgttttgccgccaaa
ctcggtatgcacatcagcccggaaaccgccgagccgattcctcgtctggcctcattgctg
catgacattccgccagcgcggttgtttgaagaatcgctgaagctcttgcaggcaggtcac
ggttaccccacctaccagctgctgtgtgaataccagttgttccagcccctgtttccgctg
attagccgctatttcaccgctaaccgcgaaagcacgatggagcggatgatagtacaggtg
ctgaaaaacaccgatcagcgtatccagaacgatatgcgcgttaacccggcgtttttgttc
tccgccatgctgtggtatccgctggtagaacacgctcagaaactgacgcaggagagtggg
cttgcctacttcgaagcgtttgcattagctatgaacgacgttctcgatgagcagtgccgc
tcgctggcaattcccaaacggatcacgtcgcttgtgcgcgatatctggcagttgcagttg
cgcctgtcgcgtcgtcagggcaaacgcgcctttaagctgatggaacacccgaaattccgt
gccgcttatgacctgctgtgcctgcgtgcggagaccgaaaaccaccaggaactacaacgc
ctggcacagtggtggggagagtttcaggtcgccgcaccgccgcgccagcaagccatgttg
aacacactggatgacggcccgacgccgcatcgtcgttcacgccgtccgcgcaagcgccca
atccatcgggataatgcccggtga
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