Dickeya poaceiphila: Dpoa569_0000927
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Entry
Dpoa569_0000927 CDS
T06188
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00040
Pentose and glucuronate interconversions
dic01100
Metabolic pathways
dic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Dpoa569_0000927
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dpoa569_0000927
Enzymes [BR:
dic01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Dpoa569_0000927
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GFIT
Motif
Pfam:
Pectate_lyase_4
DUF5749
Motif
Other DBs
NCBI-ProteinID:
QDX29196
UniProt:
A0A5B8HI75
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Position
complement(1033401..1034558)
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AA seq
385 aa
AA seq
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MNNTHVFSAGTKSVLAAIVATAMMTTAAHAASLQTTKATETASTGWATQTTGTTGGAKAA
SAKIYAVKNISEFKAALNGSDTDPKIIQVTGAIDISGGKAYTSFDDQKARSQISIPSNTT
IIGIGSNGKFTNGSLVIKGVSNIILRNLYLETPVDVAPHYEEGDGWNAEWDAAVIDNSDH
VWVDHVTVSDGSFTDDKYTTKNGEKYVQHDGSLDIKKGSDYITVSYSRFELHDKTILIGH
SDSNGAQDSGKLRVTFHNNVFDRVTERTPRVRFGSIHAYNNVYLGDVKNSTYPYLYSFGL
GTSGSILSEGNYLNIANLKSNCAVVKSFNSKVFSDNGSLINGGDAGLDNCGFTAYKPTLP
YKYSVQKISSSVADSINSNAGYGKL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacacccacgtattttctgctggaaccaaaagtgtactggcagccattgttgcc
accgcgatgatgactacagccgcccacgcagccagcctgcaaactaccaaagcaacagaa
acagcctcaaccggctgggcaacacagacgaccggcaccaccggtggcgccaaagcagcg
tcagccaaaatctatgcagtaaaaaatatcagcgaatttaaagctgcgctgaacggttcg
gataccgatcctaaaattatccaggtcactggggccattgatatcagtggtggaaaagcc
tacaccagctttgatgatcagaaagctcgcagccagatcagcattccgtctaacaccacc
atcattggcatcggcagcaacggcaaatttactaacggctctttggttatcaaaggcgtg
agcaatattatcctgcgtaacctgtacctcgaaacgccggtagatgtagcaccgcattac
gaagaaggggatggctggaacgccgagtgggatgcagcagtaatcgataactccgaccac
gtttgggttgaccatgttaccgtcagcgatggcagcttcaccgacgacaaatacaccacc
aaaaacggtgagaaatatgtacagcacgatggttcgttggatatcaagaaagggtctgac
tacatcaccgtttcctacagccgcttcgaactgcacgacaagaccatcctgatcggccac
agtgacagcaatggtgcgcaagactctggcaaactgcgcgtgacgttccacaacaacgtg
tttgaccgcgttaccgaacgtaccccacgcgtacgctttggtagtattcacgcttacaac
aacgtctatctgggcgatgtgaagaacagcacctacccatacctgtacagcttcggtctt
ggcaccagcggcagcattttatctgaaggcaactacctcaatatcgccaatctgaaatca
aactgtgctgttgtgaagtcattcaatagcaaagtgttctccgataatggttcactgatt
aacggcggcgatgccggattggataattgcggctttaccgcctacaaaccgacgctgccg
tacaaatattctgtacagaaaatcagcagcagcgttgccgatagcatcaacagcaacgca
ggttacggcaaactgtaa
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