Dickeya poaceiphila: Dpoa569_0000961
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Entry
Dpoa569_0000961 CDS
T06188
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
dic
Dickeya poaceiphila
Pathway
dic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Dpoa569_0000961 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dic03400
]
Dpoa569_0000961 (xseA)
Enzymes [BR:
dic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Dpoa569_0000961 (xseA)
DNA repair and recombination proteins [BR:
dic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Dpoa569_0000961 (xseA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDX29229
UniProt:
A0A5B8HIY3
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All DBs
Position
complement(1065814..1067199)
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AA seq
461 aa
AA seq
DB search
MSSLPSAAIFTVSRLNQTVKQLLEGEMGQIWLSGEMSNFSQPSSGHWYFTLKDERAQVRC
AMFRTSNRRVAFRPQNGQQILIRATITLYEPRGDYQLLAESMHPAGDGLLQQQFEQLKQR
LSAEGLFDQQHKQLLPKPARQVGVITSASGAALHDILHILQRRDPSLPVVIYPTAVQGAD
APDQIVRAIELANLRQECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRQQQFVKLQ
HRLHQQHPQLRLARQQTQLIRLHQRLDEAIQLQLRLQARRHERLVQRLQQYQPQSRLHRA
QQQVQHLRYRMQHALEKQLNQHKQRFGEACSHLEAVSPLATLARGYSVTTAPDGKVMKKT
AQVTRGDILKTRLLDGWVESQVTEMKKESTKSRAKSQTKNI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcattgccgtcagccgccatatttaccgtaagccgcctgaatcagacggtaaag
cagttgctggaaggcgaaatgggtcaaatctggctctccggcgaaatgtccaatttctct
cagccttcctccggtcattggtattttacgctaaaagatgaacgcgctcaggtgcggtgc
gccatgttccgcaccagcaaccggcgagtcgcctttcggccacaaaacgggcaacagatc
ctgattcgcgccaccatcacgctctatgaaccacgtggtgattaccaactgctggctgaa
agtatgcacccggcaggcgatggcctgctgcaacaacagtttgaacaattgaaacagcgc
ctgtctgcagaaggactatttgatcagcagcacaagcagttactgcccaaaccagcacga
caggttggcgtcattacctccgccagtggcgcagcactgcatgatattttacatattctg
caacgccgcgatccgtcgctgccggtggttatctacccgacggcagtgcaaggcgcggac
gctccagaccagattgtgcgggctattgagctggcgaacttgcgccaggagtgtgatgtg
ctgattgtcggtcgcggcggcggttcactggaagatctgtggagcttcaacgacgaacgg
gtggcgcgggcgatctttgccagccgcatcccaattgtcagtgcggtcggccacgaaacc
gatgtaaccatcgccgactttgtggccgacctgcgcgcaccgacgccttcagcagcggcg
gaactggttagccgtaaccagttggagttgttgcggcaaatccaatcccaacgccagcgg
ctggaaatggcgatggactattatctggcacagcgccagcagcaattcgtcaaactgcag
catcggttacaccagcaacacccgcaactacggctcgctcgtcaacagacccaattgatt
cgcctgcaccagcgtctggatgaagccatccagttgcaactgcgcctgcaggcacgacgt
catgaacgtctcgtccagcgtctgcagcaatatcagccacaatcgcgcctgcaccgtgcg
cagcagcaggtacagcacttacgctaccggatgcagcacgcgttagaaaaacaacttaat
cagcataaacagcgatttggcgaagcctgttcccatcttgaggcggtcagtccgctggcg
acactggcccgtggctacagcgtcaccactgctccggacggcaaggtcatgaaaaaaacc
gctcaagtcaccaggggcgatatcctgaaaacccggttgttggatggctgggttgagagt
caggtaactgaaatgaaaaaagaatccaccaaatcacgcgcgaaaagccagacaaaaaat
atttaa
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