Dickeya poaceiphila: Dpoa569_0001879
Help
Entry
Dpoa569_0001879 CDS
T06188
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dic
Dickeya poaceiphila
Pathway
dic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dpoa569_0001879 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dic03400
]
Dpoa569_0001879 (recC)
Enzymes [BR:
dic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Dpoa569_0001879 (recC)
DNA repair and recombination proteins [BR:
dic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dpoa569_0001879 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QDX30028
UniProt:
A0A5B8I830
LinkDB
All DBs
Position
2079181..2082657
Genome browser
AA seq
1158 aa
AA seq
DB search
MSENRLQPGLMAIHSNHPEALRDVLVSWMASNPLAGLENELILVQSNGIGQWLKLALARD
THGGGCGVAAALDVQLPSRFFWQVYRSVLGHDQVPETSPFEKSLLVWRLLRLLPELLTQP
EFATLARFLRQDTDLRKHYQLAERLADLFDQYQVYRADWLADWTAGRDVLTSHRRGVEPL
PDEQHWQPLLWRALLMDTGEALAGTSRAALHRRFLDEVKQRDDSERPAGLPSRVVVFGIS
SLSQQALELLAAIGRWTQIFMCVHNPCEHYWGDIIADKDLLRAERVRQQRKPGMPQTIAL
EELHQHAHPLLAAWGKQGRDYIGLLDEYDQRERYASLIQRADLFYSNGEDCLLHQLQDDI
RDLRPLSDSRARWPAVDSRHDRSIRFHIAHSPQREVEVLHDQLLAAFTADPTLRPRDVIV
MVPDINGYAPHIQAVFGLIDRKDPRYIPFSVADRGPRQNNLLLAALEKLLNLPQSRVAVS
DVLDLLEVPAVRQRFAIAEEQLPLLQRWVRAANVRWGLHARQRQSLNLPDAPEQNSWFFG
LRRMLLGYAVGAGGAWRNIEPLDEIGGLDAVLAGQLALLLDRLDYSWQQLCQPATPVQWG
ERLRTLLSTFFAADGGEDGFMLLQLDEGLQNWLEACESVALERALPLSVVREHWLGLFEQ
SSLTQPFFAGAVTFATLMPMRAIPFRHVCLLGMNDGDYPRNRVPLDFDLMGHDYRPGDRS
RREDDRYLFLEALLSAREHFYISWVGRSIHDNSERPPSVLVAQLRDHLSNGWRTVDGQDV
LSALTVEHRLQPFSPDYFTAGSPLFSYAREWRTGLLPQDTPATDTALDDYRQDGVLTLRQ
LADFVRDPVRSFFRLRLNVWFEQEDPTSQDQEPFAMDALENWRLQHELIEEQKAALRRHL
PREQALTAQLARIARRGELAPGGFTTVLVQDLAEPMADLFTRYQQEQEKWPKSVSDEPLL
WPDLPLEDWLNELRVDEQGNRCRLVLESGGLLHPTRRSYRFDKLLPFWVTHLAGHLDGQP
LHSTLVSKNGTVYLPALEPQQAKVYWLALVDAWREGMRYPLPLAVKTGFRWLEAGGEPDQ
ALDGEAGNAARQCYEEHDPANRKFAESASNAYLSRAFPGFDQLWANGEFARWTQQLLAPL
YLTLKAASAKNRKSGGQS
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacaggttacaacccggtttgatggcgatccacagcaaccatcctgaagct
ttacgtgatgtattggtgtcgtggatggcgtctaatccgctagccgggttggaaaacgag
ctgattctggtacagagcaacggcatcgggcagtggctgaaactggcactggcgcgtgat
acccacgggggtggatgcggcgtagccgcagcgctggacgttcagttgccgtcgcgtttt
ttctggcaggtttaccggtcggtgttggggcatgatcaggtgccggaaacctcgccattc
gagaaatcattgctggtatggcgactgttgcggctgttgcctgagctgctaacacaaccg
gaattcgctacgctggcgcgttttctgcggcaggataccgacttgcgtaagcattaccag
ttggccgaacggctggctgacctgtttgaccaatatcaggtgtatcgcgctgactggctg
gctgactggactgccgggcgtgacgtgctgaccagccaccgacgcggcgtggaaccgctg
ccggatgaacagcactggcaaccgctgttgtggcgcgcgctactgatggataccggcgag
gcgctggccggcaccagccgagcggcgctgcaccggcgctttctggatgaggtaaaacag
cgggacgatagcgaacgcccggcagggttaccctcgcgggtggttgtctttggcatctca
tcgttgtcacagcaggcactggaactgctggccgccattgggcgctggacccagatattc
atgtgcgtacataacccgtgcgagcattactggggcgatattattgccgataaggacctg
ctgcgtgccgagcgtgtccgccagcaacgtaaacccggtatgccgcagaccatcgcgctg
gaagaactgcatcaacatgcccacccgctgttggcggcgtggggtaaacaagggcgcgat
tacatcgggctgctggatgaatatgatcagcgcgagcggtacgcctcactgattcagcgt
gccgacctgttttacagcaacggcgaagactgtctgctgcatcagttacaggacgacatt
cgggatttgcgaccgctgtcggacagccgtgcgcgctggcctgccgtcgattcacggcat
gatcgttcgatccgttttcatattgcgcatagtccacagcgtgaagtggaagtgctgcat
gaccaactgctggcggcatttaccgctgacccgacgctgcgtccgcgagatgtgatcgtg
atggtgccggacatcaacggctatgcgccgcatattcaggcggtgttcgggttgatcgac
cggaaggacccgcgttacatcccgttcagcgtggcggatcgtgggccgcgccagaataac
ctgctgctggcggcgctggaaaaattgttaaacctgccgcagtcacgcgtggcggtcagc
gatgtgctggacttgctggaggtgccggcggtgcgccagcgctttgccatcgctgaagaa
caattgccgctgttgcagcgctgggtccgggctgccaatgtgcgctgggggttacacgcc
cgtcagcgccaaagccttaacctgcctgatgcgccggaacagaatagctggttttttggt
ctgcgccgtatgttgctggggtacgcggtgggtgcaggcggtgcctggcggaatattgaa
ccgctggatgaaatcggtgggctggatgcggtgctggctgggcaactggcgctgttgctt
gaccggctggattatagctggcagcagctctgtcagcctgcgacaccggtgcaatggggt
gaacggttacgtacgctgttgagcacgttctttgccgcagatgggggggaagacggcttc
atgctgctgcaactggacgaaggattacagaactggctggaggcgtgcgaatcggtcgcg
ctggagcgggcgttaccgctgtcggtggtgcgcgagcactggctggggctgtttgagcag
tcgagcctgacccagccgttttttgctggtgccgtcaccttcgccacgctgatgccgatg
cgcgccattccatttcgtcatgtctgtctgctgggaatgaatgacggcgattatccccgt
aaccgggtgccgctggacttcgacctgatggggcatgactaccgccccggcgatcgttcc
cgccgcgaagacgaccgctacctgtttttggaggcactgctgtcggcgcgtgaacatttt
tacatcagttgggtggggcgtagcatccacgataacagcgaacgcccgccttcggtgctg
gtggcgcaactgcgcgaccatctaagcaacggctggcggaccgttgacgggcaggatgtg
ttgtccgcgttgacggtggaacaccggttgcagccattcagcccggattattttaccgcc
ggcagcccgttgttcagttatgcccgcgaatggcgcaccgggctgctgccacaggatact
ccggctacggataccgcgctggacgattatcggcaggatggcgtgctgacgctgcggcaa
ctggcggattttgtccgtgacccggtacgcagtttcttccggttgcggctcaacgtctgg
ttcgaacaggaagaccccaccagtcaggatcaggaaccatttgccatggatgcgctggaa
aactggcgcttgcaacatgaactgatcgaggaacagaaagccgcgttacgtcggcatctt
ccccgtgagcaggcgctgacggcacaactggcacgcatcgcccggcgcggcgaactggcg
cccggtggcttcaccacggtgctggtgcaggatttggcggagcctatggcggatttgttc
acccgttaccagcaggaacaggaaaaatggccgaaatcggtatctgacgaaccgctgttg
tggcccgatttaccgctggaagactggctgaatgaactgcgcgttgatgagcagggcaac
cgctgtcggctggtgctggaaagcggcgggttgctccatcccacacggcgtagttaccgc
ttcgacaagctattgcctttctgggtgacgcatctggccgggcaccttgatgggcaaccg
ctgcatagtacgctggtcagcaaaaacggtactgtttacctgccggcgctggaaccgcag
caggcgaaagtgtactggctggcgctggtcgatgcctggcgagagggaatgcgttacccg
ttgccgctggcggtaaaaaccggatttcgctggctggaagcgggcggagaaccggatcaa
gcgctggatggtgaagcgggtaacgcggcacgccagtgctatgaggagcatgacccggct
aaccgcaagtttgctgaatccgcgtctaacgcctatctgtcccgcgcgtttccaggcttc
gaccagttgtgggccaacggcgagttcgcccgctggacgcagcaactgctggcaccgctg
tacctgacgctgaaagcggcgtcggcgaaaaataggaaatcaggaggccagtcatga
DBGET
integrated database retrieval system
