Dickeya poaceiphila: Dpoa569_0002097
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Entry
Dpoa569_0002097 CDS
T06188
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dic
Dickeya poaceiphila
Pathway
dic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dpoa569_0002097 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dic02000
]
Dpoa569_0002097 (msbA)
Enzymes [BR:
dic01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
Dpoa569_0002097 (msbA)
Transporters [BR:
dic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Dpoa569_0002097 (msbA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
RsgA_GTPase
Zeta_toxin
AAA_22
APS_kinase
AAA_29
AAA_25
MMR_HSR1
AAA_16
nSTAND3
NB-ARC
AAA_15
Motif
Other DBs
NCBI-ProteinID:
QDX30229
UniProt:
A0A5B8HN37
LinkDB
All DBs
Position
complement(2323760..2325508)
Genome browser
AA seq
582 aa
AA seq
DB search
MINDKDLSTWQTFRRLWPMISPYKAGLAVAAVALVINAAGDTLMLSLLKPLLDDGFGKAD
RSVLVWMPLAIIGLMVVRGISSYISSYCVAWVSGKVVMNMRRRLFSHIMGMPVSFFDQQS
TGTLLSRITYDSEQVAASSSNALVTVVREGASIIGLFVLMFWYSWQLSLILVLIAPIVSY
SMRVVSRRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVEVERFDAVSNRMRQQ
GMKMVSASSISDPVVQFIASLALAFVLYAASFPSVMETLTAGTITVVFSSMFTLMRPLKS
LTNVNAQFQRGMAACQTLFTILDMEQEKDTGTRVLEQARGDIEFRDVKFAYPGKETLALR
NISLHIPPGKTVALVGRSGSGKSTIANLITRFYDIQSGEILLDGNDLRDYTLPSLRSQVA
LVSQNVHLFNDTIANNIAYACGDRYSREDIERAARMAHAMDFIDKLEQGLDTVIGENGVL
LSGGQRQRIAIARALLRDCPILVLDEATSALDTESERAIQAALDELQKNRTALVIAHRLS
TIENADEILVVEDGQIIERGQHVELLARNGAYAQLHKLQFGA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattaatgataaagatctctccacatggcagacgtttcgtcgcctatggccgatgatc
tctccttacaaagccgggttggcagtggcggcggtggcattagtgatcaatgctgccggc
gatacgctgatgctatctctgctcaagccgctgctggatgacggatttggcaaggctgac
cgcagtgtgctggtgtggatgccgctggctattatcggattgatggttgttcgtggtatc
tccagctatatttccagttattgtgtggcctgggtgtcaggcaaagtcgtgatgaacatg
cgtcgtcgtctgttcagccacataatggggatgccggtttccttctttgaccagcagtct
accggtactttgttatcccgcattacgtatgactctgaacaggtggctgcgtcgtcgtca
aacgcgttggttactgtcgtgcgcgaaggcgcatccatcattggcctgttcgtactgatg
ttttggtacagctggcagttgtcgttgattttggtgttgatagcgccaattgtctcctac
agtatgcgggtcgtgtcccggcgttttcgcagtatcagtaaaaacatgcagaacaccatg
gggcaggtaaccaccagtgctgaacagatgctgaaagggcacaaagaagtactgattttc
ggtggacaggaagtagaagtggaacgctttgatgcggtgagtaatcgtatgcgccagcag
ggcatgaagatggtttccgcgtcctctatttctgatccggtagtccagtttattgcatca
ctggcgttggcgttcgtgttgtacgccgctagctttccgtcggtgatggaaaccctgacc
gctggcaccatcacagtggtgttctcgtctatgtttaccctgatgcgcccactaaagtcg
ctcaccaacgttaatgcccaattccagcgcggtatggcagcttgccaaacgctgtttacc
attctggatatggaacaggaaaaagataccggcacgcgcgtactggaacaggccaggggc
gatatcgaattccgtgatgtcaaattcgcttatccgggtaaagaaacactggcgctgaga
aatatcagcctgcatattccgccggggaaaacggtggcattggtgggccgttccggttca
ggcaagtccactattgcgaatctcatcacccgtttttacgatatccagtccggtgaaatt
ctgctggatggaaatgatttgcgtgactacacgctgccgtcgttacgtagtcaggttgcg
ttggtgtcgcagaatgtgcacctgttcaacgataccatcgccaacaatatcgcctatgcc
tgtggtgatcgttacagccgtgaggatattgaacgagcagccagaatggctcatgcgatg
gattttatcgacaaactggaacagggcttggatacggtgatcggcgagaacggcgtattg
ctgtccggcggtcaacgtcaacgtatcgccattgccagagcactgctgcgagattgtccg
attttagtgctggatgaagcgacttcagcactggataccgaatcggaacgcgccattcag
gcggcactggatgaattgcagaaaaatcgtactgcattggtgattgcacatcggttgtcc
acgattgagaatgcggatgaaattctggtggttgaggatgggcagatcatcgagcgtggt
cagcatgttgagcttctggcccgaaacggagcctatgctcagctacataaactgcagttt
ggcgcatga
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