Dickeya poaceiphila: Dpoa569_0002130
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Entry
Dpoa569_0002130 CDS
T06188
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dic03009
]
Dpoa569_0002130
Ribosome biogenesis [BR:
dic03009
]
Prokaryotic type
ribosomal protein modification factors
Dpoa569_0002130
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Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QDX30259
UniProt:
A0A5B8HN80
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All DBs
Position
2358739..2360505
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AA seq
588 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQQLLDLGFNIEEASWLNPVPNVWSVHIRDRDCALCFTNG
KGATRKAALASALGEYFERLSTNYFFADFYLGQQIAESEFVHYPDEKWFPLPEDDSLPEG
ILDTRLHAFYDPDQQLVASDLIDLQSGNHSRGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTRNEARVQGLSEVFERYVKNRIIAEAISLPSIPAEVLSRYPGVVEAIATLEQE
GFPIFAYDASLGGHYPVICVVLLNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDNEEVAEHTNLETHFIDSSGLISWDLFKNQPDYAFADWDFSGTTEQEFATLM
AIFDKEDKEVYIADYEHLSVYACRILVPGMSDIYPAEDLLLANNSMGAHLRETLLSLPDS
QWEKEDYLALLQQLDDEGLDDFTRVRELLGIATGKDNGWFTLRIGELKSMLALAGGDLEQ
ALSWAEWSLDFNQSVFSPARSNYYRCLQTLLQLALEPELDPAQYYDAFVRMYGQDAVETA
SAAISGEQCFYGLFTVDTDLKALPAHQSLLAAYEKLQRAKRKHWQVKK
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaacgtttatcccaggcaaagacgccgccctggaagattccatcgcccgtttt
caacaacagctcctcgacctggggttcaacatcgaagaagcatcctggctgaatccggtg
cccaacgtctggtcggtacatattcgtgaccgcgattgcgccttgtgtttcaccaatggt
aaaggtgcgacccggaaagccgcactggcttcggcactgggtgaatacttcgaacggctg
tccaccaactacttttttgccgacttctatctgggccaacagatcgccgaaagcgaattc
gtgcattatcccgacgagaagtggttcccacttcccgaagatgacagcctgccggaaggt
atactggatacccgtctgcacgccttctatgacccggaccaacagcttgtcgccagcgac
cttattgatctgcaatcaggcaaccacagccgcggcatctgcgctctaccgtttacccgg
cagtccgatcagcagacggtttatatcccgatgaacatcatcggtaatttgtacgtgtcg
aacggcatgtcggcaggcaatacccgcaatgaagcgcgtgttcaggggctgtcagaagta
ttcgaacgctatgtgaagaatcgcattatcgctgaagccatcagcctgccgtcgatcccg
gctgaagtgttatcacgttacccaggcgtggtggaagcgattgctacgctggaacaggaa
ggtttcccgatctttgcttatgacgcttctctcggcggccactacccagttatctgcgta
gtgctgctcaacccggccaatggcacctgttttgcatcgtttggcgcacatccggatttt
ggcgtcgcgctggaacgtaccgtcaccgaactgttgcaaggccgtggactgaaagatctg
gacgtgttcacgccgccgacattcgataatgaggaagttgccgaacacaccaatctggaa
acccattttatcgattccagcggtctaatctcctgggacctgttcaaaaaccagccagac
tatgccttcgccgactgggatttcagcggcacgaccgagcaggaatttgcgacgctgatg
gcaatcttcgataaagaagacaaagaggtgtatatcgcagattacgagcatctgtcagtg
tacgcctgccgcattctggtgcctggcatgtcggacatctacccggcagaggacctgctg
ctggcgaacaacagcatgggagcgcatctacgcgaaacactgttatccttaccagacagc
caatgggaaaaagaagattatctggccctgctgcagcaacttgatgatgaaggattggat
gactttacccgtgtgcgcgagttgctggggatcgcaaccggcaaagataatggctggttt
acactacgtattggcgaactgaaatccatgctggcgctggctggcggcgatctggagcag
gcgttaagctgggcggagtggtcgctggatttcaatcagtctgtcttttcaccagcacgc
agtaattattaccgctgtctacaaacgctgctgcaactggctctggaacctgagctcgac
cccgcgcaatactatgatgctttcgtgcgcatgtatggacaggatgcagtggagacggca
agcgccgctatttccggtgagcagtgcttctatggcttgttcacagtggatactgacctg
aaagcgttgcctgcccatcagtcgttattggcagcttatgaaaaattgcaacgcgctaag
cgcaagcactggcaggtaaaaaaataa
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