Dickeya poaceiphila: Dpoa569_0002287
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Entry
Dpoa569_0002287 CDS
T06188
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
dic
Dickeya poaceiphila
Pathway
dic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dpoa569_0002287 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dic03400
]
Dpoa569_0002287 (uvrB)
DNA repair and recombination proteins [BR:
dic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dpoa569_0002287 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dpoa569_0002287 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
AAA_30
UB2H
DUF4686
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
QDX30399
UniProt:
A0A5B8HNS7
LinkDB
All DBs
Position
complement(2537505..2539517)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKAFKLHSAFKPAGDQPEAIRRLKEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQ
YSRNDQAFGRGTFRVRGEVIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQTVPR
YTIYPKTHYVTPRERILQAMEDIKVELAERRQVLLAGNKLLEEQRLSQRTTFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLD
PELEVRPVTTQVDDLLSEIRKRSAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYADRITPSMERAINETQRRREKQQAYNEQHGIVPQGLNKKIGDILQIG
QPVNGKGKGRGKKAAEPTARYQQLSPKALDQKIRELESQMLAHAQNLEFEEAARLRDEIH
ALREQFIAAS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagcgttcaaactgcattctgccttcaaacctgccggcgaccagcctgaagcg
atacgtcgtctgaaagaggggttggaggatgggctggcgcaccagacgttgctgggggta
acagggtccggcaagaccttcactatcgccaacgtgattgccgacctcaatcgcccgact
atggtgctggcgcccaataaaacgctggcggcacagttgtatggcgagatgaaggcgttt
ttcccggagaatgcggtggagtatttcgtctcttactacgactactaccagcctgaagcc
tacgtgccgagttctgataccttcatcgagaaggatgcgtcggttaacgaacatatcgag
cagatgcggttgtccgccactaaagcgctgctggagcggcgcgacgtagtcgtggtggcg
tcggtctccgccatttacggcctgggtgatccggatctttatcttaaaatgatgctgcac
ctgacgcagggcatgttgattgaccaacgcgcgattttacggcgactggcggaattgcag
tattcccgaaacgatcaggcatttggacgcggtactttccgggttcgcggtgaggtcatc
gatattttcccggcggaatctgaagatatcgccctgcgggtggaattgtttgacgaagaa
gtggaacggttgtcgctgttcgacccgctcaccggtcacattgtgcagacggtgccgcgc
tacactatttaccccaaaacgcactatgtgacgccacgcgaacgtatcctgcaggcgatg
gaagacatcaaggtcgagctggctgagcgccgtcaggtactgctcgccggcaataaattg
ctggaagaacagcggctgtcgcaacgcactacgtttgatctggagatgatgaatgagctg
ggctattgctccggcattgaaaactactcacgctttttgtctggccgaggaccgggcgag
ccgccgccgacgctgttcgactacctgccggctgacggcctgctggtgatcgacgagtcc
cacgttaccattccgcagttgggcgggatgtaccgcggtgaccgggcgcgcaaggaaacg
ctggtggagtatgggtttcgtctgccgtcggcgctggataaccggccaatgaaatttgaa
gaatttgaagcgctggcgccgcagacgatttatgtctcggcgacgccgggcaattatgaa
ctggagaaatccggcggcgaagtgattgatcaggtggtgaggccgaccggcctgctggac
ccggaactggaagtacgcccggtgaccacccaggtggacgacttgctctcagaaatccgc
aagcgttccgccatcaacgagcgtgtgctggtcaccaccctgaccaagcgcatggcggaa
gacctgaccgaatatctggaagagcacggcgagcgggtacgctacctgcactcggatatc
gataccgtagagcgggtggagatcatccgtgatttgcggctgggcgaattcgatgtgctg
gtgggcatcaacctgctgcgtgaagggctggacatgccggaagtgtcgctggtggcaatt
ctggatgcggataaagaaggcttcctgcgctctgaacggtcgctgattcagaccatcggt
cgggcggcgcgtaacctcaacggtaaggcgattttgtacgccgacaggattacgccgtcg
atggagcgcgccatcaatgaaacccaacgtcgccgggagaagcaacaggcatacaatgaa
caacatggcattgtaccgcagggcctgaacaagaagattggcgacattttgcagattggt
cagcctgtcaacggtaagggcaaagggcgcggcaagaaagcggcggaaccgacggcccgg
tatcagcaactgtcgccgaaagcgctggaccagaaaatccgagaactggaaagccagatg
ctggctcatgcacagaatctggagttcgaagaggccgcccgtctgcgcgacgaaatccac
gcgctacgcgagcagtttattgcggcatcctga
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integrated database retrieval system
