Dickeya poaceiphila: Dpoa569_0002379
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Entry
Dpoa569_0002379 CDS
T06188
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00300
Lysine biosynthesis
dic00470
D-Amino acid metabolism
dic01100
Metabolic pathways
dic01110
Biosynthesis of secondary metabolites
dic01120
Microbial metabolism in diverse environments
dic01230
Biosynthesis of amino acids
Module
dic_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Dpoa569_0002379
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dpoa569_0002379
Enzymes [BR:
dic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Dpoa569_0002379
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDX30481
UniProt:
A0A5B8I7U1
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All DBs
Position
complement(2639842..2641095)
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AA seq
417 aa
AA seq
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MAKLPQHVHEVIVHLQQQQADPLAAFVYDLTALRQHVSEVMAALPPGVELYYAIKANSEK
PILDAIAPLVHGFEISSGGEIDRVAGCATRKPFVFSGPGKLDSDFDLALQQGVEAMHVES
RHEIARLQQRAKQHGVLQPVFIRINPELASSLTSKLAMAGTPTPFGIDEADLADAVRDVD
NASHLQLKGFHVHAMSHQMSVDRHQQLLDLYLTRWPQWKALSAYPQHITHMNVGGGIGVP
YLTPSRFDWPALCDYLQTWLAQQPDAPVVRFEPGRFISAYCGYYAIEVLDKKRSHGKHFL
VCRGGTHQFRLPVAQGHDHPIIHLPLGSALATGETCDWTVVGQLCTPKDVLSRDQRLTDV
NIGDLLVLPLAGAYGYNISHADFLCHPRPVQYFITDEGVITANGTSMDVTGAVCRVS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttgccccagcacgttcacgaggtgattgtccacctgcaacagcaacaggcc
gacccgctggccgcatttgtgtatgacctgactgcgctgcgccagcacgtcagcgaggtg
atggcggcattgccgccgggtgtcgaactctattacgccatcaaagccaacagcgaaaaa
ccgattctggatgcgattgcaccgctggtgcacgggtttgaaatttcgtcgggtggcgaa
atcgaccgcgtggccggttgtgccacgcgcaaacctttcgtgttctccgggccgggcaaa
ctggactcggatttcgatctggcgctgcaacagggcgtggaagccatgcatgtagaaagc
cgccatgagattgcccgcctgcaacagcgggcgaagcagcatggcgtgctccagccggtg
ttcatccgcatcaatccggaactggcctcgtcgctgaccagtaaactggcgatggctggc
acgccgacgccgttcggtatcgacgaagccgacctggcggacgcggtgcgcgatgtggat
aacgccagtcatctgcaactgaaagggttccatgtccatgccatgtcacaccagatgagc
gtggatcgccatcaacaactgctggatctgtatctgacacgctggccgcaatggaaagcg
ttgtccgcgtatccacagcatattacccatatgaacgtaggcggcggcatcggcgtgccg
tacctgacgccatcgcgtttcgactggccggcactgtgcgattacctgcagacgtggctg
gcgcaacaacccgatgcgccggtagtccgttttgaaccggggcgtttcatcagcgcctac
tgtggttattacgccatcgaggtgctggataaaaagcgcagccacggtaaacattttctg
gtttgccgcggcggtacccatcagttccgcctgccggtagcgcaaggtcacgaccatccg
attattcacctgccactggggtcagcgctggcaacgggggagacgtgcgactggacggtg
gtcggccaattgtgcacgccgaaagatgtgctcagccgcgatcagcgtctgaccgacgtc
aacatcggggatctgctggtgctgccgctggcaggcgcctacggctacaacatttctcat
gctgatttcctgtgtcatccgcgccctgtgcaatatttcatcactgacgaaggcgttatc
acggcgaacggcaccagcatggatgtaaccggagcggtgtgccgtgtctcatag
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