Dickeya poaceiphila: Dpoa569_0002761
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Entry
Dpoa569_0002761 CDS
T06188
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dic03400
]
Dpoa569_0002761 (sbcD)
DNA repair and recombination proteins [BR:
dic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dpoa569_0002761 (sbcD)
Archaeal homologous recombinant proteins
Dpoa569_0002761 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QDX30827
UniProt:
A0A5B8IE45
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All DBs
Position
3064986..3066218
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AA seq
410 aa
AA seq
DB search
MRIIHTSDWHLGQYFYTRSRAPEHQAFLHWLVEQVEQYQVDAVIVAGDVFDTGAPPSYAR
EMYNQFVVALQRTGCQLVVMGGNHDSVATLNESRALLACLNTQVVAGFEGDIHQQVLVLN
NRAGEPGALLCAIPFLRARDLLTSQAGQSGAQKQQALQDAIASHYQHSYQLACEQRATLG
RALPIVMTGHLTTVGVATSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVAQCEH
IRYSGSPIPLSFDELNHEKSVYLVHFEQGKLQEVTALTVPTEQPMQLVKGNLPEIERRLA
GFRDYHGDKPVWLDIEIATQDYLSDMQQHIQTLTEPLNVEVLLLRRAREQQQQMLVQLEK
ETLEELQPAEVFERRLALEADLDEAHQQRLKGLFNRIMQEIDAQRQETSA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattattcacacgtctgactggcatctcggtcagtacttttatacccggagccgt
gcgcctgagcatcaggcatttttgcactggctggttgagcaggttgagcaatatcaggtt
gatgcagtaatagtagcaggtgatgtgttcgacaccggcgcaccgcccagttacgcccgt
gaaatgtacaatcagtttgtcgtcgcgttgcagcgcaccggttgtcagttggtggtgatg
ggcggcaaccatgactcggtcgccacgctgaacgaatcacgcgcgctgctggcctgcctg
aatacccaggtagtggctggctttgagggcgatatccaccagcaggtgctggtgctgaac
aaccgtgccggcgagccaggcgcattgttgtgtgctatcccattcctgcgcgcacgcgac
ctgctcaccagccaggcaggccagtctggcgcacaaaaacagcaagcattacaagatgcc
atcgccagccattatcagcacagttaccagcttgcctgcgaacagcgcgccacgctgggt
cgggcgttgccgattgtgatgaccggacacctcaccacagtgggcgtcgccacttccgac
tcggtgcgtgatatttatatcggcacgttagacgcctttccggcacaagctttccccccg
gcagactatattgcgcttggtcatattcatcgcccacagcgggtggcgcaatgcgagcat
atccgttacagcggctcgcctatcccgctaagctttgacgagttgaatcatgagaaatcg
gtctatctggtgcactttgaacagggcaaattacaagaggtcactgcgctgacggtgccg
actgaacaacctatgcaactggtgaaaggcaacctgccggagatcgaacgccgtctcgcc
ggattccgtgactatcatggcgacaaaccggtatggctggatattgagatcgccacgcag
gactacctgagcgacatgcaacaacacattcaaacgctgaccgaaccgttgaatgtggaa
gtgctgctgctgcgtcgtgcgcgggaacaacagcaacaaatgctggtgcaactggagaaa
gaaacgttggaagagttgcagcctgccgaagtatttgagcggcgtctggcgctggaggca
gacctggatgaggcgcatcagcaacgcctgaaaggattgttcaaccggattatgcaagag
atagacgcacagcggcaggagacatccgcatga
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