Dickeya poaceiphila: Dpoa569_0002920
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Entry
Dpoa569_0002920 CDS
T06188
Symbol
traD
Name
(GenBank) type IV conjugative transfer system coupling protein TraD
Organism
dic
Dickeya poaceiphila
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Paralog
GFIT
Motif
Pfam:
TraG-D_C
TrwB_AAD_bind
T4SS-DNA_transf
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDX30967
UniProt:
A0A5B8IEM4
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Position
complement(3227666..3229750)
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AA seq
694 aa
AA seq
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MSHKYVIESLLRPAVELNTAIVASCATCLCLTAPWSIALAPSVSWVPAVGFGVLAMKRTR
EGLRILRYRRNIRRLPRYVVSSHQIPVSHKRLFLGRGFAWTPIHTQRVMEARRPELAHFV
QPGALYRAARSLEQRFEHVPALCKLTRWDSPLNPARPLPPVGGSSIYHGVEPDEQDVSYD
LGERVGHMLVIGTTRVGKTRLAELLITQDIRRGDVTIVFDPKGDADLLRRMWAEARRSGR
ENEFYVFHLGWPDISARYNAIGRFSRVSEVASRISGQLSGEGNSAAFKEFAWRFVNIVAR
ALVAQGQRPDYTLVLRYVTNIGELYESYAESLLARVAPQLLIDAENLLSTLDERNLPRNL
SGQPNAMKVWALETVLGSEAAKALVYDPVLDGLRSAVRYDRTYFDKIVASLLPLLEKLTT
GKTAGLLSPDYDDMDDPRPIFNWLDVIRKKGVVYIGLDALSDAAVASAVGNSMFADLVSV
AGHIYKFGLGEGLDNTEKTPINLHCDEFNELMGDEFIPLINKGGGAGIQVSAYTQTVSDI
EARIGSAAKAAQVVGNFNSLIMLRVRENTTAELLTSQLPEVDVYTKTLMSGVTDVSNPEH
GSDFTSNVQDSVSSVRMPMITPADVINLPKGQAFALLEGGKLWKIRMPLPASENDPLMPE
SIEKIAEYMQRNYRTAESWWSEPGIDAPLSQGAA
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagccataaatatgtgattgaatcgctgttgcggccagccgttgagctgaatacggcc
attgtcgccagctgtgcgacttgtctgtgcctgactgctccctggtcgattgcactggcc
ccgtctgtcagttgggtgcctgcggtcggatttggtgtactggcgatgaagaggacgagg
gagggactgcggatattgcgttatcgccgtaatatccggcgcctgccgcgttacgttgtg
tccagtcatcaaattccggtcagccataaacggttattcctggggcgtggttttgcctgg
acgccgatacatacccagcgagtgatggaggcgcgtcggccagagctggctcattttgtc
cagcccggggcgctttatcgggcggcccgatcactggagcagcgatttgaacatgtgccg
gcattatgcaagttgacgcgatgggattcgccgctgaacccggcacgccctttgccgccg
gtggggggcagctcgatttaccacggtgtggagccggatgagcaggatgtcagctatgac
ctgggagagcgtgttggtcatatgctggtgattgggaccacccgcgttggcaagacccga
ctggctgaattgttgatcacgcaggatatacgtcggggggacgtgactatcgtctttgac
ccgaaaggggatgctgacctgctgcggcgtatgtgggcagaagcccggcgatccggccgg
gaaaatgaattttatgtgtttcatctgggctggccagacatcagcgcccgctataacgcc
attgggcggttcagccgcgtgtcagaagttgcttcacgtatctcagggcagttgtccggg
gagggcaattccgcggcatttaaagaatttgcgtggcgtttcgtcaatatcgttgctcgc
gcgctggtggctcaggggcagcgcccggattacaccctggtgttgcgttatgtgaccaac
atcggggaattgtacgagagctatgcggagagcctgctggccagagtggccccccagttg
ctgatagacgcggagaacctgctgtccacgctggacgaacgtaaccttccccgcaatttg
tccgggcagccgaacgcaatgaaagtctgggcgctggaaaccgtgctcggcagcgaggcg
gccaaggcactggtatatgatccggtactggatgggctgcgctccgcggtgcgctatgac
cgtacctatttcgacaagatagttgcgagtctcctgccgttgctggaaaaactcaccacc
ggtaagacagcggggctgctgtcaccggattacgacgatatggacgacccccgccccatc
ttcaactggctcgatgttatccgtaagaaaggcgttgtctacattggcctggatgcgctg
tccgatgcggcggtggcatcggcggtcggcaattccatgtttgccgaccttgtttctgta
gctggccatatctacaaatttggtctcggcgaagggttggacaataccgagaaaaccccg
attaacctccactgtgacgaatttaacgaattgatgggcgacgagttcattcccttgatc
aacaaaggcgggggcgcagggatacaggtttctgcatatacacagacggtctctgatatt
gaggctcgcatcggcagtgcagcgaaggcggcgcaggttgtaggcaactttaactcgctc
atcatgctgcgtgttcgtgagaacaccaccgccgagctgctcaccagtcagttgcctgaa
gtcgacgtctataccaagacgctgatgtctggtgtgacggatgtgtctaacccggagcat
ggcagcgatttcaccagtaatgttcaggatagcgtgagctcagtgcggatgccgatgata
acgccggcagatgtgatcaacctgccgaaagggcaagcttttgcgttacttgaggggggc
aagttgtggaagattcggatgccgttgccggcatccgaaaatgatcccttgatgccggag
agcatcgagaaaatagcggaatacatgcagcgtaactacagaacggcggagtcctggtgg
tctgagcctggcatagacgcgcccttgagccagggagcggcgtga
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