Dickeya poaceiphila: Dpoa569_0003056
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Entry
Dpoa569_0003056 CDS
T06188
Name
(GenBank) tRNA/rRNA methyltransferase
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dic03009
]
Dpoa569_0003056
03016 Transfer RNA biogenesis [BR:
dic03016
]
Dpoa569_0003056
Ribosome biogenesis [BR:
dic03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dpoa569_0003056
Transfer RNA biogenesis [BR:
dic03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Dpoa569_0003056
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
DUF6764
Motif
Other DBs
NCBI-ProteinID:
QDX31088
UniProt:
A0A5B8IBY0
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All DBs
Position
complement(3376147..3377247)
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AA seq
366 aa
AA seq
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MSDTLSGKGGKVRVMYVRSEDGDEKSKPKRTPDKRRGEGDNNRSGARKGRDGSPRSGRDR
DNKENAGRGGKWRGESERRERPRSEPTEYADSPWKTVSRAPTEEPDHGGISGKSQIDPEQ
IRRQRAEETRVYGENACQALFLSRPEAIVRGWFLQEVTPRFRDALRWMAANRKAYHVVED
DELVRASGTEHHGGVCFLIKKRRGLDVAAYLREAGETDCVLALEDVGNPHNLGGIMRSCA
HFGVKGVLVNDASQLESGAAVRTAEGGAEHVKAISAEGLVDALAQFRDAGYTIVTTSSHK
GTTLSKTSLPAKTVIVLGQEGDGLSDSAWQQGDVKVSIDGTGNVESLNISVATGILLAEW
WRQNHS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacattgagtggaaagggcggtaaagtccgtgtcatgtacgtccgtagtgag
gacggggatgagaagagcaagccgaaacgtacgccggataagcggcgtggtgaaggtgac
aacaaccgtagcggtgctcgtaaagggcgtgatggctcgccacgcagtgggcgagataga
gacaataaagagaatgccggacgcggcggcaaatggcgcggtgagtcggaaaggcgtgag
cgcccacgtagtgagccaactgagtatgccgattctccctggaaaacggtatcgcgtgcg
cccacagaggagccggatcacggcggtatcagcggcaagagccagattgatccagaacag
attcgccgccagcgggcggaagaaaccagagtttatggcgagaacgcttgtcaggcgttg
ttcctgagtcgtccggaagcgattgtacgtggctggtttttgcaggaagtgacgccgcgt
tttcgtgacgcgctacgctggatggcggccaaccgcaaggcttaccacgtggtggaagac
gacgagctggttcgtgcgtccggcacagagcatcacggcggcgtgtgttttctgatcaag
aaacgccgtggtctggatgtcgcggcttacctgcgtgaggcgggggaaactgactgtgtg
ctggcgctggaagatgtgggtaatccacataatctgggcgggatcatgcgtagttgcgcg
cactttggtgtgaaaggcgtgctggtcaatgatgcatcgcagttggagtctggtgctgcg
gtgcgtacggcagaaggcggtgctgagcacgtgaaagcaatcagtgccgagggtctggtt
gatgcgctggcgcagttccgcgatgccggttacaccattgttaccacctccagtcacaag
ggcaccacgttgtcgaaaacctcgttgcctgccaaaacagtgattgtgctgggtcaggaa
ggtgatggtttgtccgacagcgcctggcaacagggtgacgtcaaggtgtcgattgacggt
accggcaatgtggaaagtttgaatatttcggtggcgactggaatcttactggcagaatgg
tggcggcagaatcatagctaa
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