KEGG   Dickeya poaceiphila: Dpoa569_0003202
Entry
Dpoa569_0003202   CDS       T06188                                 
Name
(GenBank) type II toxin-antitoxin system VapC family toxin
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
dic  Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:dic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dic03016]
    Dpoa569_0003202
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dic02048]
    Dpoa569_0003202
Transfer RNA biogenesis [BR:dic03016]
 Prokaryotic type
  tRNA degradation factors
   Dpoa569_0003202
Prokaryotic defense system [BR:dic02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    Dpoa569_0003202
SSDB
Motif
Pfam: PIN PIN_3
Other DBs
NCBI-ProteinID: QDX31213
UniProt: A0A5B8IAR4
LinkDB
Position
complement(3531101..3531517)
AA seq 138 aa
MNNIYMLDTNICSFIMREQPEVVIKKLEQSVLRNQRIVVSAITYAEMRFGATGPKASPRH
IQLVDEFCARLDAILPWDRAAVDATTDIKVALRLAGTPIGPNDTAIAGHAIAAGAVLVTN
NVREFARVPGLTMEDWVK
NT seq 417 nt   +upstreamnt  +downstreamnt
gtgaataacatttacatgctggacaccaacatctgctcgttcatcatgcgcgagcaaccg
gaagtcgtgataaaaaaacttgaacagtcggtgctgcgtaaccagcggattgtggtctcg
gctatcacctatgccgaaatgcgcttcggggccaccggcccgaaggcctcgccacgccac
attcagctggtcgatgaattctgcgcccgcctcgatgccatcctgccctgggatcgtgcc
gctgtggacgccaccacggacattaaagtggcgctgcggctggccgggacccccatcggc
ccgaacgacacggcgatcgccgggcacgccattgccgccggtgccgtgctggtgacgaat
aatgtgcgggagtttgcgcgggtgcccggcctgacaatggaagactgggtaaaatag

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