Dickeya poaceiphila: Dpoa569_0003222
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Entry
Dpoa569_0003222 CDS
T06188
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
KO
K02653
type IV pilus assembly protein PilC
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dic02044
]
Dpoa569_0003222 (gspD)
02035 Bacterial motility proteins [BR:
dic02035
]
Dpoa569_0003222 (gspD)
Secretion system [BR:
dic02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
Dpoa569_0003222 (gspD)
Bacterial motility proteins [BR:
dic02035
]
Pilus system
Pilus assembly proteins
Dpoa569_0003222 (gspD)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Secretin
Secretin_N
type_II_gspD_N0
KH_SLS1_1
Ig_SMCHD1_8th
TMEM234
Motif
Other DBs
NCBI-ProteinID:
QDX31230
UniProt:
A0A5B8IHT8
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All DBs
Position
complement(3551926..3554028)
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AA seq
700 aa
AA seq
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MNNVLRLNVFVFIFMVSNSVCAEKETTTDDVHALATTQSENTSKKYSASFREVDIKEFVA
TAAKILKKNIIIDPSITGQISVRSYEDLDENQYLVFFMNVMEAYGYSVVSVDNHTLNIVP
QAQSLRAAWAEGNKGRGKNIVVRLAKMDTLSGAELEPILSAIAESSAVKLKYYSPGNLFI
FTGREDVVERLVGIVNQVDNARKDNSPAVFSLSQAKASDVAKSLQNTFRNLNPEDKDAPL
IYGNDATRTIVVKGGAQVKAEIGRLISAMDVPGQQSQVFFLKYADAVQMAKLFNNNQSGS
SEAGAFSGSSMAMEALLAQQSQQLQGGMTPAGQSTNLDSQATGGSLSGSGGTDFSTDPSS
MFGSSMSGDGDTLLKQIHVHADRDNNALVVSAPPAAMKQVSSIIRQLDVRHEQVLVEAIV
VEVQKAEGLNLGISWGNKNYGGSNFNGVNVGKGFTQDNPLVNALKNGEGLVAGFYHGNWG
TLFNSLESNRGNNILATPSVVTLDNHRAEFNVGQDVPILTGSRTTNNDNIFNTVQRRTIG
IKFSIVPRINQSGTILLNISQEISSLSDTRQVNNNLGSVFNIRTVNNVVQVQDGETVVIG
GLLDDEKKETVDKVPLLGDIPFLGNLFKYTSRNNDKRNLMLFIRPRIIRSDSADTVQMRR
GASSPVADETAQDASHTRESPHADVNAILNGIHKFTVSLR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgttttgagactaaacgtatttgtttttatttttatggtgtcgaatagtgtt
tgtgctgaaaaagaaacgacgacagatgatgttcatgctttggctaccactcaatctgag
aatacatcaaaaaaatattcagcgtcatttcgtgaagtagacataaaagagtttgttgcc
actgcggcaaaaattttaaagaagaacattattattgacccgtccattacggggcagatt
tcagtacgtagttatgaagacctggatgaaaatcaatacctcgttttttttatgaacgtg
atggaagcttatggctacagcgtggtttcagttgacaaccataccctgaatatcgtccct
caggcgcaatcgttgcgggcggcctgggctgaaggtaataaagggcggggaaaaaatatt
gtagtgcgcctggcaaaaatggacacgctgtctggcgctgaactggaacccatcctgagt
gctattgcggaaagcagcgcagtgaaactgaaatattactcgccaggaaacttgtttatt
ttcactggccgcgaggatgtcgttgaacgactggtgggcattgttaatcaggttgacaat
gccaggaaagataacagtccggcggtatttagcctgagtcaggcaaaagcatcggatgtt
gctaaatccttgcagaataccttcagaaacctcaacccggaagataaggatgcgccttta
atttatggcaacgatgcgaccaggactattgtggtaaaaggtggcgcgcaagttaaggcg
gagatcggtcgtttaatttcagccatggatgtgccaggtcagcaatcccaggtgtttttt
ttaaagtatgctgatgcggtgcaaatggcgaagctgtttaacaataatcagtcgggaagt
tctgaggctggcgctttttcgggtagttcgatggcgatggaagcgctgctggcgcaacaa
tcacaacagttgcagggcggcatgactcctgctgggcagtccaccaatctggacagtcag
gctaccggcggctctttatctggatctggcggtacggatttttcgaccgaccccagcagt
atgttcggcagcagtatgtccggtgacggcgatacgctgctaaagcaaatccacgtccat
gctgatcgtgataacaatgccctggtcgtcagtgcaccgcctgccgcaatgaagcaggtg
tcatccattatacggcagcttgatgtccggcatgagcaggtactggttgaagcgattgtc
gtggaagtgcagaaagcagaaggactgaatctcggtatctcctggggaaataaaaactac
ggtggcagcaacttcaatggcgttaatgtcggcaagggattcacgcaggataatccattg
gtgaatgcgttaaaaaatggcgagggattagtggccggtttttatcacggcaattggggg
acgctgtttaattcgcttgaaagtaaccgaggaaataatattctcgccactcccagcgtg
gttactctggataatcaccgggcggaatttaacgtcggtcaggatgtgcctattttaacc
ggttcgagaacgaccaataacgataatatttttaataccgttcagcgacgcactattggg
attaaattcagtatcgtgccgcgcataaatcagagtggaactatcctgttgaatatatcc
caggaaatttccagtttgtctgatacccgacaggtgaataataatctcggttcggtgttt
aatattcggacggtgaataacgtcgtgcaggttcaggatggcgaaaccgtcgtcattggc
ggattactggatgatgaaaagaaagagaccgttgataaagttcccctgttaggcgatatc
ccttttctgggaaatttattcaagtatacctctcgtaataatgataaacgcaatctgatg
ttatttatccgtccacgtattattcgtagcgacagtgctgatacggtgcagatgaggcga
ggcgcatcttcccctgtggctgatgaaaccgcgcaggatgcatcacacacgagggaaagc
ccacatgctgatgttaacgccattctgaacggtatccataaatttacggtgagcttgcgc
tga
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