Dickeya poaceiphila: Dpoa569_0003310
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Entry
Dpoa569_0003310 CDS
T06188
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Dpoa569_0003310 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dic01007
]
Dpoa569_0003310 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dic03016
]
Dpoa569_0003310 (lysS)
Enzymes [BR:
dic01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Dpoa569_0003310 (lysS)
Amino acid related enzymes [BR:
dic01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Dpoa569_0003310 (lysS)
Transfer RNA biogenesis [BR:
dic03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Dpoa569_0003310 (lysS)
Prokaryotic type
Other AARSs
Dpoa569_0003310 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
QDX31303
UniProt:
A0A5B8IB37
LinkDB
All DBs
Position
complement(3647591..3649108)
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AA seq
505 aa
AA seq
DB search
MSEPQNQGAEQALDLNNELRTRREKLAALRDTGIAFPNDFRRDSTADKLHASYDEKENEE
LEALGLEVTVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
ILGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANDES
RHTFRVRSQILAGIRQFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRS
LAQNVLGTTEVPYGDQVFDFGKPFEKLTMREAIKKYRPETNLADLDSFDAAKAIAESIGI
KVEKSWGLGRLVTEIFEEVAEAHLIQPTFITEYPAEVSPLARRNDQNPEITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacaaaaccagggtgccgagcaggcgctggatcttaacaacgaacttaga
acccgccgtgagaagctggcggcgttgcgtgataccggcatcgcttttccgaacgatttc
cgccgtgacagcactgccgataaactgcacgccagctatgacgaaaaagaaaacgaagag
ctggaagcactgggtctggaagtgacggtagcgggtcgcatgatgacccgccgtatcatg
ggcaaggcgtcgttcgtcacgttgcaggatgtcggtggccgtattcagttatatgtggcg
cgtgatgacctgccggaaggcgtctacaacgagcagttcaagaagtgggaccttggcgat
atcctcggtgcgcgcggtaaactgtttaaaaccaaaaccggcgaactgtcgatccactgt
accgaattgcgtctgctgaccaaggcgttgcgcccgttgccggacaaattccacggtctg
gcggatcaggaaacgcgttaccgccagcgttatctggatctgatcgctaacgacgaatcc
cgccacactttccgcgtgcgctcacagattctggccggtatccgccagttcatggtcggt
cgtgattttatggaagtggaaacgccgatgatgcaggtgatccccggtggggcgtctgct
cgcccgttcatcacccatcacaacgcgctggatatcgacatgtacctgcgtattgcgcca
gaactgtacctgaaacgtctggtggtcggtggttttgaacgcgtgtttgagatcaaccgt
aacttccgtaacgaaggtgtgtcgccgcgtcataaccctgagttcaccatgatggaactc
tacatggcgtatgcggactacaaagacctgatcgaactgaccgagtcgctgttccgctcg
ctggcgcagaacgttctgggtactaccgaggtgccgtatggcgaccaggtgttcgacttt
ggtaagccgttcgagaagctgaccatgcgtgaagccatcaagaaataccgtcccgaaacc
aatctggcggatctggatagcttcgatgcggctaaagctattgcggagtctatcggcatc
aaggtagagaaaagttggggtctgggtcgtctcgttaccgagatcttcgaagaagtggca
gaagcccatctgatccagccgacattcatcaccgaatacccggctgaagtctcgccattg
gcgcgccgtaacgaccagaatccggaaatcaccgaccgcttcgaattcttcatcggcgga
cgtgaaatcggtaatggtttctccgagttgaacgacgctgaagatcaggcgcaacgcttc
caggatcaggtagcggcgaaagatgccggtgatgatgaagccatgttctacgacgaagac
tacgttactgcgctggagcacggcctgccgccgaccgcgggtctgggtatcggcattgac
cgtatggtaatgttgtttactaacagccacaccatccgcgatgtgatcctgttcccggcg
atgcgtccgcagaaataa
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