Dickeya poaceiphila: Dpoa569_0003351
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Entry
Dpoa569_0003351 CDS
T06188
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dic
Dickeya poaceiphila
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dic03016
]
Dpoa569_0003351 (truB)
Enzymes [BR:
dic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Dpoa569_0003351 (truB)
Transfer RNA biogenesis [BR:
dic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dpoa569_0003351 (truB)
Prokaryotic type
Dpoa569_0003351 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDX31340
UniProt:
A0A5B8II80
LinkDB
All DBs
Position
complement(3688269..3689225)
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AA seq
318 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRLFNANKAGHTGALDPLATGMLPVCLG
EATKFSRYLLDADKRYRVIARMGQRTDTSDADGNVIQERPVAFTHDMLMQALDSFRGDTQ
QVPSMYSALKYQGRPLYEYARQGLVVPREARDITVYELQFIRWEADELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVMYLRRLQVATYPTERMVTLEQLQTLSEQVQAQQQPIGELLDVL
LLPMDTAVQAFPEVNLSLVVAGYLKLGQAVRAAAAPADGMVRITEGDEHRFIGMGEIDDE
GRVAPRRLVVEYPVPVDA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtcctcgtcgtcgtggtcgggatatccacggcgttctgctgctggataaaccg
caaggggcatcatctaacgatgtactgcagaaggtaaagcgcctcttcaatgctaataaa
gccgggcataccggtgcgctggatccgctggcgacggggatgctgccggtatgtctgggt
gaggcgaccaagttttcccggtatttgctggatgctgataaacgttaccgggtgattgca
cgtatgggacagcgcaccgatacgtcggatgctgacggcaacgtgattcaggagcgtcca
gttgcctttactcatgacatgttaatgcaggcgctggatagtttccgcggcgatacccag
caggtaccgtcgatgtactctgcactgaaatatcaggggcgcccgttatacgaatatgcc
cgtcaggggctggttgtgccgcgggaagcgcgtgatatcactgtttatgaactgcagttt
atccgctgggaagccgatgagctggaactggaaatccattgctccaagggaacttatatc
cgcaccatcattgatgatctgggtgaaaaactggggtgtggcgctcatgtgatgtatctg
cgccgtttgcaggttgcaacgtatcctaccgagcgtatggtcaccctggaacagttgcag
acgctcagtgagcaggtgcaagcacagcaacagccgatcggtgaattgctggatgtgctg
ctgttgccgatggatactgctgtgcaggcgtttccggaagtgaatctgtcgctggtcgtg
gcgggttacctcaagttgggccaggcggtacgtgctgctgcggcaccagctgatggcatg
gtgcgtatcaccgagggggacgaacaccggtttatcggtatgggtgaaattgatgatgaa
gggcgggtagcaccacggcgtctggtagtggaataccctgtgccggtagatgcctga
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