Dickeya poaceiphila: Dpoa569_0003608
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Entry
Dpoa569_0003608 CDS
T06188
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dic
Dickeya poaceiphila
Pathway
dic02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dpoa569_0003608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dic02000
]
Dpoa569_0003608
Transporters [BR:
dic02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dpoa569_0003608
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
QDX31560
UniProt:
A0A5B8IJG1
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All DBs
Position
complement(3968069..3969610)
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AA seq
513 aa
AA seq
DB search
MNRRHFIKSACALSVAAATTGWPLSAAWGADAVAQPKKGGHLIVGVDNASSTDRLDPAFW
FETYMYFVGSQLFNNLLELDEKGELVPSLAESWDSKDGGRTWVLTIRKGVQFHDGRTLSA
KDVIYSLNHHRGEKSSSSVKGYLDPVVTMDATGSHEVTIRLSEPNVEFIALLSDVHFAIT
PENESFDKGIGTGAFILESFQPGVRTLVKRNPNHWNSERGHVDSVETLAMNDSTARVAAL
VSGSAHIINRVNPRIVGRIQNMPTLQLLRSRDSQIFTFPGLSNVAPFNNEDGRLALKYAI
DRQQIIDTVLGGYASVANDNPIFPSNRYFAKDIPQRPYDPEKAKWHWQKAGFSGPLTLSV
ADAGFPGAVDAGQLYQASAQKAGITLNVEREPDDAFWDNVWMKKPFVSSNWSVRPTADAL
LSLVFTSQAPWNESAWKNDSFDQLVRAARGEVNEDKRRQIYHDIQVMLVDNSSEIIPLYA
DALDACSTNVKGLNAIPGFPLSGNRAAEKVWLA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtcgccattttattaagagcgcctgcgccctgtccgtcgcggcggccactacc
ggctggccgctgagcgctgcctggggagcggacgcggttgcacaaccgaaaaaaggtggc
cacctgattgtcggggtggataacgcctccagcactgaccgtctcgacccggcattttgg
ttcgaaacttatatgtatttcgtgggttcccaactgtttaataacctgctggaactggat
gaaaaaggcgaactggtgccgtcgctggccgaatcctgggacagcaaagacggtggtcgc
acctgggtgttgactattcgcaaaggcgtgcagtttcatgatggccgcacgctcagcgcc
aaagacgtgatctactcgctcaatcaccaccgtggcgagaaatccagctcgtcggtgaaa
ggctatctcgacccggtggtgacgatggacgctaccggcagccatgaagtgaccatccgc
ctgagcgaaccgaacgtggaattcatcgcgctgctgagcgatgtgcactttgccattacc
ccggaaaacgaaagctttgacaaaggcatcggcaccggcgcttttattctggaaagcttc
cagccgggtgtgcgcacgctggtgaaacgcaacccgaatcactggaacagcgagcgcggc
catgtcgattcagtcgaaacgctggcaatgaacgactccaccgcccgtgtggcggcgctg
gtgagtgggtcggcgcatatcatcaaccgcgtcaatccgcgcatcgtcggtcgcattcag
aacatgccgaccctgcaactgttacgctcgcgtgacagccagattttcaccttccccggt
ttgagcaatgtcgcaccgttcaacaatgaagatggccgactggcgctgaaatacgcgatt
gatcgccagcagattatcgataccgtgttgggcggctacgccagcgttgccaacgacaat
ccgatttttccgtctaaccgttacttcgccaaagacattccccagcgtccgtacgacccg
gaaaaagccaaatggcactggcagaaagccggtttcagcggcccactgacgctctctgtc
gctgatgccggtttccccggcgcggtggatgccggtcagttgtatcaggcgtcggcacag
aaagccggtattacgctcaatgtggagcgcgagccggatgatgctttctgggacaatgtc
tggatgaaaaaaccgtttgtctcctccaactggtcggtacgtccgactgccgacgcgttg
ctgtcgctggtgttcaccagtcaggcaccgtggaacgaatcagcctggaagaacgattct
ttcgatcagttggtgcgtgcggcgcgtggtgaagtcaacgaagataagcgccgtcagatc
tatcacgatattcaggtgatgctggtggacaacagcagcgaaatcattccgctgtacgcc
gacgcgcttgacgcctgcagtaccaacgtgaagggattgaatgccattccgggcttcccg
ctgagcggcaaccgtgcagcggaaaaagtgtggctggcctga
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