Dickeya poaceiphila: Dpoa569_0003741
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Entry
Dpoa569_0003741 CDS
T06188
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00071
Fatty acid degradation
dic00280
Valine, leucine and isoleucine degradation
dic00310
Lysine degradation
dic00362
Benzoate degradation
dic00380
Tryptophan metabolism
dic00410
beta-Alanine metabolism
dic00640
Propanoate metabolism
dic00650
Butanoate metabolism
dic00907
Pinene, camphor and geraniol degradation
dic00930
Caprolactam degradation
dic01100
Metabolic pathways
dic01110
Biosynthesis of secondary metabolites
dic01120
Microbial metabolism in diverse environments
dic01200
Carbon metabolism
dic01212
Fatty acid metabolism
Module
dic_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
Dpoa569_0003741 (fadB)
00650 Butanoate metabolism
Dpoa569_0003741 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
Dpoa569_0003741 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dpoa569_0003741 (fadB)
00310 Lysine degradation
Dpoa569_0003741 (fadB)
00380 Tryptophan metabolism
Dpoa569_0003741 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Dpoa569_0003741 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Dpoa569_0003741 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Dpoa569_0003741 (fadB)
00930 Caprolactam degradation
Dpoa569_0003741 (fadB)
Enzymes [BR:
dic01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Dpoa569_0003741 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
Dpoa569_0003741 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
Dpoa569_0003741 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
Dpoa569_0003741 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Peptidase_S49
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QDX31678
UniProt:
A0A5B8IE40
LinkDB
All DBs
Position
4111999..4114188
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AA seq
729 aa
AA seq
DB search
MIYQGDTLYLNWLEDGIAELVFAAPGSVNKLDTRTVASLGEALNHLIKQPSLRALLLRSD
KPAFIAGADITEFLSLFAAPQETLHQWLTGANAIFSQLEDLPVPTLSAINGYALGGGCEC
VLATDFRLATPDVRIGLPEVKLGIMPGFGGTVRLPRLLGADNALEIITAGKDLSADEALK
VGLVDAITNSDKLLSSAVHMLRLAAEEKLDWRTRRRQKQSPLRLNRIEATMSFATANALV
QQAADRHYPAPIMALKTIEAAAGLQRDAALKLETDNFVTLTQTTAAYALVGVFLNEQAVK
SAAKKWAGDASPPARAAVLGAGIMGGGIACQSARKGVSVWMKDISEKALTLGMEEAAKLL
NAQLERGKLDAMTMAGVLARIHPTLNNHGLEQVDLIIEAVVENPQVKARVLADIEACVSE
QTLIVSNTSTIPIGQLAASLQRPQHFCGMHFFNPVHRMPLVEVIRGPQTDEKTLARVVAY
ASKIGKTPIVVNDCPGFFVNRVLFPYLAAFSLLLRDGADFRDVDAVMEKQFGWPMGPAYL
LDVVGLDTAHHAQAVMSAGFPQRMAKTYRDAVDVLVEHQRFGQKSGAGFYRYTPDAKGKP
RREQDEQTDILLGAVCEPKRTFSAQEIIHRLMVPMLNEVARCLEEGIVATPAEADMALLY
GLGFPPFHGGACRYIDTLGSRHYVDIAQSLASLGPLYATPESLLQMAQSQQRYYPAVDAH
ATLSLHQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcgacacgctgtacctcaactggctggaagacggcattgccgagctg
gtttttgccgcccccggcagcgtcaacaagctggatacccgcacagtggctagccttggc
gaagccctgaatcacctgataaaacaaccttcactccgggcgttactgctgcgctcggac
aaacccgcgtttattgccggagcggacatcaccgaattcctgtcgctgtttgccgccccg
caggaaacattgcatcagtggctgaccggtgccaacgccatttttagccaactggaggat
ttgccggtgccgacgctatccgccatcaacggctatgcgctgggcggagggtgcgagtgc
gtgctggcaaccgatttccgtcttgcaacacccgacgttcgcatcggcctgccggaagtc
aaactggggatcatgccggggtttggcggcacagttaggttaccgcgactgctgggggcc
gacaacgcgctggaaatcattaccgccggtaaagacctgtctgccgacgaggccctgaaa
gtcggactggtcgatgcgattaccaacagcgacaagctgttgtcttctgccgtgcatatg
ttgcgcctggcagcggaggaaaaactggactggcgtacccgtcgccgtcagaaacaatcg
ccgctacggcttaaccgtatcgaagcgaccatgagttttgccaccgccaatgcgctggtg
caacaggcggcagaccgtcactaccccgccccaatcatggcgctcaaaaccattgaagcc
gccgctggattacagcgtgacgcggcattgaagctagaaaccgacaattttgtcacactg
acgcaaacaacggcagcatatgcactagtcggtgtattcctgaacgagcaggccgtaaaa
agcgccgcaaaaaaatgggcgggcgacgcctcgccgccggctcgtgcggcggtactgggt
gccgggattatgggcggcggcattgcctgccagtcggcacgcaaaggggtatcggtgtgg
atgaaagacatcagtgaaaaagccctgacactggggatggaggaagcggccaagctactg
aacgcacaactggaacgcggcaaactggacgccatgaccatggccggcgtgctggcccgt
atccacccgacactgaacaaccacgggcttgaacaggttgacctgattatcgaagccgtg
gtggaaaatccacaggtaaaagccagagtgctggcagatatcgaagcctgcgtcagtgag
cagacattgatagtctccaatacctcgacgattcccatcgggcaattagcggcctcattg
cagcggccacaacatttctgcgggatgcattttttcaaccccgtgcaccgtatgccactg
gtggaagtgatccgaggaccccagaccgatgagaaaacgctggcccgtgtggtggcctac
gccagcaagataggcaaaaccccgattgtggtgaatgactgcccaggttttttcgtcaac
cgtgtgctgtttccctatctcgcggcctttagcctgttgctgcgtgacggtgcggatttc
cgtgacgtggatgcggtgatggagaaacagttcggctggccgatgggaccggcttatctg
ctggacgtggtcgggctggataccgcccaccatgctcaggcggtgatgtcggcaggcttt
ccgcaacgcatggcaaaaacctatcgtgacgcggtcgatgtgctggtagagcatcaacgt
ttcggccagaaaagcggcgcaggcttctaccgctacaccccagacgccaaaggcaaacca
cgccgggagcaggacgagcaaaccgatatcttgttgggtgcagtttgcgagccgaagcga
accttcagtgcgcaagagattatccatcgactgatggtgccgatgctcaacgaagtcgca
cgttgtctggaagagggcatcgtcgccaccccggcagaagccgacatggcgctgctttac
ggtctgggtttccccccattccatggcggagcctgtcgctatatagacacactgggcagt
cggcactatgtggacatcgcccagtcattggcatcactggggccgctttacgccacaccg
gaaagtctgctgcagatggcgcagagccagcagcgttattacccggcggttgacgctcac
gccactctttctcttcaccaacctgcataa
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