Dickeya poaceiphila: Dpoa569_0003779
Help
Entry
Dpoa569_0003779 CDS
T06188
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dic
Dickeya poaceiphila
Pathway
dic00541
Biosynthesis of various nucleotide sugars
dic01100
Metabolic pathways
dic01250
Biosynthesis of nucleotide sugars
Module
dic_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
dic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Dpoa569_0003779 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dic01005
]
Dpoa569_0003779 (rfaD)
Enzymes [BR:
dic01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Dpoa569_0003779 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dic01005
]
Core region
Dpoa569_0003779 (rfaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
QDX31714
UniProt:
A0A5B8IBX0
LinkDB
All DBs
Position
4153222..4154154
Genome browser
AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDDGYRDILVVDNLKDGTKFVNLVDLDIADYMDKEDFIASI
VAGDDLGDIDAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLERGIPFLYASSAATY
GGRTDNFVENRQYEQPLNVYGYSKFLFDQYVRDILPQADSQICGFRYFNVYGPRESHKGS
MASVAFHLNNQINQGENPKLFAGSENFKRDFVYVGDVAAVNLWFWQHNVSGIFNCGTGRA
ESFQAVADAVLAWHNKGSVEYIPFPEKLKGRYQAYTQADLTNLRAAGYDKPFKTVAEGVA
DYLTWLNRNA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggcggcgccggcttcatcggcagcaacatcgtaaaggcgctgaat
gatgatggataccgggatattctggtggtcgacaaccttaaagatggcaccaagttcgtc
aatctggtcgatctggacattgccgactacatggataaggaagatttcatcgccagtatc
gttgccggcgacgacctgggcgatatcgacgccatcttccatgaaggcgcctgctcctcc
accaccgagtgggacggcaagtacatgatggataacaactatcagtactccaaagaagta
ctgcactactgtctggagcgcggcatcccatttctgtacgcgtcttccgccgcgacttac
ggtgggcgcaccgacaacttcgtggaaaaccgccagtacgagcagccgctcaacgtctac
ggttactctaagttcctgttcgaccaatatgtgcgcgatattctgccgcaggccgactcg
caaatttgcggcttccgctactttaacgtctacgggccgcgcgaaagccacaaaggcagt
atggcaagcgtcgcattccacctgaacaatcagatcaatcagggcgagaatccgaaactc
ttcgccggcagcgaaaatttcaaacgcgacttcgtttatgtcggtgacgtggcggcggta
aacctgtggttctggcagcataacgtttccggcatcttcaactgcggtactggccgcgcc
gaatccttccaggctgtggcggacgcggtgctggcctggcacaacaaaggcagtgtggaa
tacattcccttcccggaaaaactaaaaggccgctatcaggcttacactcaggcagacctc
actaatctgcgcgctgccggttacgacaaaccattcaaaacggtagctgaaggggtagct
gactacctgacctggctgaaccgcaacgcctga
DBGET
integrated database retrieval system
