Dietzia sp. DQ12-45-1b: GJR88_00634
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Entry
GJR88_00634 CDS
T11395
Name
(GenBank) DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
did Dietzia sp. DQ12-45-1b
Pathway
did03030
DNA replication
did03430
Mismatch repair
did03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
did00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJR88_00634
03430 Mismatch repair
GJR88_00634
03440 Homologous recombination
GJR88_00634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
did03032
]
GJR88_00634
03400 DNA repair and recombination proteins [BR:
did03400
]
GJR88_00634
Enzymes [BR:
did01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJR88_00634
DNA replication proteins [BR:
did03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJR88_00634
DNA repair and recombination proteins [BR:
did03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJR88_00634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QGW23466
LinkDB
All DBs
Position
432910..433851
Genome browser
AA seq
313 aa
AA seq
DB search
MSGWVVVDVETSGMRPSVDRVLSVAAVVIDDDGEVLEEFVTLLNPGVDPGPVHVHGLTPA
LLAGKPRYADVAADLARVLDGRTVVAHNATFDASFLASEARRAGLEPPLEQFLCTLDFAG
RLHLSTADLKLVTLAAHFGVEQRAAHDAHDDALVLAGVFAGMLQVAAAKAVQPTVRRLDG
MVADPETGFLVSRVWAEALAAPRLWRPAGRLKRGGGLVQGMEVVFTQDVDRDPEEIAGLV
VDAGLYLADRISSRTSLAVCDAPGAVRGRAAFARKKGLELVPFARFSEMLADVAPGRPVA
GAQAVDSAQEALF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggtgggtggtggtggacgtcgagacgtccgggatgagaccgtccgtcgaccgg
gtgctgtcggtggcggcggtggtgatcgacgacgacggcgaggtgctcgaggagttcgtg
actctgctgaacccgggtgtcgacccggggccggtccacgtgcacggcctcaccccggcc
ctgctcgcgggcaaaccgcgctacgccgacgtggccgcggacctggcgcgggtgctcgac
ggccggacggtggtggcccacaacgccacgttcgacgcgtccttcctggcctcggaggcg
cggcgggccggactcgagccgccgttggagcagttcctgtgcacgctggacttcgcgggc
cggctccatctgtccaccgccgacctcaagctggtcacgctcgccgcgcacttcggcgtg
gagcagcgggccgcgcacgacgcccatgacgacgcgctggtgctggccggggtgttcgcg
gggatgctgcaggtcgccgcggccaaggccgtgcagccgacggtgcggcgcctcgacggg
atggtggcggatccggagacgggcttcctcgtctcccgcgtgtgggccgaggccctggcc
gcgcccaggctctggcggccggccggacggctgaagcgaggcggcgggctggtgcagggg
atggaggtggtcttcacccaggacgtcgaccgcgacccggaggagatcgccggcctcgtc
gtcgacgcaggtctctacctggccgaccgcatctcctcccgcacctcgctggccgtgtgc
gacgcgcccggcgcggtccggggccgcgccgccttcgcccgcaagaaggggctcgaactg
gtcccgttcgcccggttctccgagatgctcgccgacgtggcgcccgggcggcccgtcgcg
ggtgcccaggcggtggacagcgcgcaggaggcgctcttctga
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