Dietzia sp. DQ12-45-1b: GJR88_01420
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Entry
GJR88_01420 CDS
T11395
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
did Dietzia sp. DQ12-45-1b
Pathway
did00020
Citrate cycle (TCA cycle)
did00190
Oxidative phosphorylation
did00650
Butanoate metabolism
did00720
Other carbon fixation pathways
did01100
Metabolic pathways
did01110
Biosynthesis of secondary metabolites
did01120
Microbial metabolism in diverse environments
did01200
Carbon metabolism
Module
did_M00009
Citrate cycle (TCA cycle, Krebs cycle)
did_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
did_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
did00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GJR88_01420
00650 Butanoate metabolism
GJR88_01420
09102 Energy metabolism
00190 Oxidative phosphorylation
GJR88_01420
00720 Other carbon fixation pathways
GJR88_01420
Enzymes [BR:
did01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GJR88_01420
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
HI0933_like
Pyr_redox_2
FAD_oxidored
DAO
DUF1978
Motif
Other DBs
NCBI-ProteinID:
QGW23947
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All DBs
Position
complement(961573..963339)
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AA seq
588 aa
AA seq
DB search
MTDRQVHQHQYDVVIVGAGGAGMRAAIEAGPRTRTAVLTKLYPTRSHTGAAQGGMCAALA
NVEEDNWEWHTFDTVKGGDYLVDQDAAEIMAKEAITAVIDLENMGLPFNRTPEGKIDQRR
FGGHTRDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYVLDLCLTETPDGP
VATGCVAYELASGDLHVFHSKATVFATGGSGRMYKTTSNAHTLTGDGMAVVFRKGLPLED
MEFHQFHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVL
EVREGRGAGPDKDYVYIDVTHLGADVLEEKLPDITEFSRTYLGVDPVTELVPVFPTCHYV
MGGIPTNVKGEVLRTNDDVVPGLYAAGECACVSVHGSNRLGTNSLLDINVFGRRAGIAAA
EYAAGHDFVELPEEPEKMVREWMESMLAEHGTENANDIRTEMQAMMDDKASVYRTEQSLT
EARDELRALKKRYADVTVSDKGKRFNTELLEAVELGFLLEMAEVTVVSALNRKESRGGHA
REDYPDRNDDEFMKHTMAFKDGLGLLSEVRLDWKPVVQTRYEPMERKY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcgtcaggtccaccagcaccagtacgacgtggtaatcgtcggcgccggcggc
gcaggcatgcgcgcggccatcgaggcgggcccgcggacccgcaccgccgtcctcaccaag
ctctaccccacccgctcccacaccggcgccgcgcagggcggcatgtgcgccgccctcgcg
aacgtggaggaggacaactgggagtggcacacgttcgacacggtcaagggcggcgactac
ctcgtcgaccaggacgccgcggagatcatggccaaggaggccatcaccgcggtcatcgac
ctggagaacatgggtctcccgttcaaccgcacgcccgagggcaagattgaccagcgccgc
ttcggtggccacacccgtgaccacgggaaggcacccgtgcgccgggcctgttacgcggcc
gaccgcaccgggcacatgatcctgcagacgctgtaccagaactgcgtcaagcacgacgtg
gagttcttcaacgagttctacgtcctcgacctgtgcctcacggagacccccgacgggccg
gtcgccaccgggtgcgtggcctacgagctcgcctccggcgacctgcacgtcttccactcc
aaggccaccgtcttcgcgaccggcgggtcgggccggatgtacaagaccacctccaacgcc
cacaccctcaccggtgacggcatggccgtggtgttccgcaagggtctgcccctggaggac
atggagttccaccagttccacccgacgggactcgccggcctgggcatcctcatctccgag
gcggtccgcggcgagggcggcatcctgcgcaacgcggacggcgagcgcttcatggagcga
tacgcccccaccatcaaggacctcgcgccgcgcgacatcgtcgcccgctcgatggtcctc
gaggtgcgcgagggccgcggtgccgggcccgacaaggactacgtctacatcgacgtgacc
cacctcggggcggacgtcctcgaggagaagctgccggacatcaccgagttctcccggacc
tacctgggcgtcgacccggtcaccgagctggtcccggtgttcccgacgtgtcactacgtc
atgggcggcatcccgaccaacgtcaagggtgaggtcctgcgcaccaacgacgacgtggtg
cccggcctctacgcggcgggcgagtgcgcctgcgtgtcggtgcacggctccaaccggctg
ggcaccaactccctgctggacatcaacgtgttcggccgccgggcagggatcgccgcggcg
gagtacgccgcgggtcacgacttcgtcgagctccccgaggagcccgagaagatggtccgc
gagtggatggagagcatgctcgcggagcacggcacggagaacgccaacgacatccgcacc
gagatgcaggcgatgatggacgacaaggcgtcggtgtaccgcaccgaacagtcgctcacc
gaggcccgggacgagctccgcgccctcaagaagcgctacgccgacgtgaccgtcagcgac
aagggcaagcgattcaacaccgagctcctggaagccgttgagctgggcttcctcctcgag
atggcagaggtgacggtggtgagcgcgctcaaccgcaaggagtcccgcggcggccacgcc
cgggaggactaccccgaccgcaacgacgacgagttcatgaagcacacgatggcgttcaag
gacggcctcggcctcctctcggaggtccggctggactggaagccggtcgtgcagacccgc
tacgagccgatggagcgtaagtactga
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