Dietzia sp. DQ12-45-1b: GJR88_02962
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Entry
GJR88_02962 CDS
T11395
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
did Dietzia sp. DQ12-45-1b
Pathway
did03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
did00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJR88_02962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
did03400
]
GJR88_02962
Enzymes [BR:
did01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GJR88_02962
DNA repair and recombination proteins [BR:
did03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJR88_02962
Prokaryotic type
GJR88_02962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QGW24946
LinkDB
All DBs
Position
complement(2029682..2030392)
Genome browser
AA seq
236 aa
AA seq
DB search
MLGGDAGRRPLDELVEPGWARALAPVEVRIRRMGDFLRQENSAGRGHLPTGDRILRAFTQ
PFDDVRVLIVGQDPYPTPGHAVGLSFAVDGHVRPLPRSLVNIYREYTDDLGLPAPAHGDL
SAWTRSGVLLLNRVLTVAPGQPASHQRKGWEEVTGRAIEALIERNRPMVAILWGRQAQSL
GPMLGGTPVIASAHPSPLSASRGFFGSRPFSRANDELCRLGVDPVDWRLPELPDQT
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgggggcgacgcgggccgacgcccgctggacgagctcgtcgaaccggggtgggcg
cgcgcgttggcgccggtcgaggtccgcatccggcgaatgggcgacttcctgcgccaggag
aattcggcggggcgcggccacctccccaccggtgaccggatcctgcgcgcgttcacccag
ccgttcgacgacgtccgcgtgctgatcgtgggtcaggacccctatccgaccccgggccac
gccgtcggtctgagcttcgccgtggacggacacgtccgccccctgccgcggagtctggtc
aacatctaccgcgagtacaccgacgacctcgggctgccggcccccgcacacggtgacctg
agtgcctggacccgcagcggcgtgctcctcctcaaccgggtgctcaccgtggctccgggg
cagcccgcctcccaccagcgcaaagggtgggaggaggtcaccgggcgggcgatcgaggcg
ctgatcgagcgcaaccgaccgatggtcgcgatcctctgggggcgccaggcacagtccctc
gggccgatgctcgggggcacaccggtcatcgcctccgcgcatccctcgccgctgtcggcc
tcgcgtgggttcttcgggtcccgcccgttcagccgcgcgaacgacgagctgtgccggctc
ggcgtggaccccgtcgactggcggctgcccgagctgccggatcagacgtag
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