KEGG   Dietzia sp. DQ12-45-1b: GJR88_04235
Entry
GJR88_04235       CDS       T11395                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
did  Dietzia sp. DQ12-45-1b
Pathway
did03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:did00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    GJR88_04235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:did03400]
    GJR88_04235
DNA repair and recombination proteins [BR:did03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     GJR88_04235
SSDB
Motif
Pfam: Ku HC2 YL1 CIS_TMP Glypican
Other DBs
NCBI-ProteinID: QGW25785
LinkDB
Position
complement(2899898..2900917)
AA seq 339 aa
MRSIWKGEVSFGLVNVPVKVYSATEDHDLRARQVDKKDGVRIRYKRVRDDNGEEVEYSDI
AKAYESDDGETVILTKDELASLPVEQNHEIEVTEFVPADQVDPVAFDNAYFLEPASRSNR
AYVLMREALESTDRLAICTFTLRNRTRLCALRVYKDVLMLQTLLWPDEIRPAILEGLDKE
AKVRPQEVKMAASLIETMAADFEPEKYEDDYQNQLKELIEAKAAGGEAFTVEEREEASDD
DGDDEVADLLAALRASVKDRGGEADDESDDDEDSGSGKKSSAKKSNSSSAKKTATKKAPA
KKAAAKKSTAKKEPAKKSTSKSSSARKSTAKKAPAKKSA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgcgatccatctggaagggcgaggtctcctttggtctggtgaacgtgccggtcaaggtg
tattcggcgaccgaggaccacgatctgcgcgcgcggcaggtggacaagaaggacggggtg
cggatccgctacaagcgggtgcgggacgacaacggcgaggaggtcgagtactccgacatc
gccaaggcgtacgagtccgacgacggcgagacggtgatcctcaccaaagatgagttggcg
tcgctgccggtggaacagaaccacgagatcgaggtgacggagttcgtcccggccgatcag
gtggatccggtggcctttgacaacgcctacttcctggagccggcgtcacgctccaaccgg
gcgtatgtgttgatgcgagaggcgctggagtccacggaccggttggcgatctgcacgttc
acgctgcgcaaccgcacccggttgtgtgcgctgcgggtgtacaaggacgtgctgatgctc
cagacgctgctgtggccggatgagatccgcccggcgatcctggagggcctggacaaagag
gccaaggtccggccgcaggaggtcaagatggcggcctcgctgatcgagaccatggccgcg
gatttcgagcccgagaagtacgaggacgactaccagaatcagctcaaggagctcatcgag
gccaaggccgccggcggggaggcgttcaccgtggaggagcgcgaggaggctagcgacgac
gacggcgacgacgaggttgccgacctgctcgccgccctgcgcgcgagcgtgaaggatcgc
gggggcgaggcggacgacgagtccgacgacgacgaggattccggctcggggaagaagtcg
tccgcaaagaagagcaactcgagctcggccaagaagacggcaaccaagaaggctcccgcc
aagaaggcagcggctaagaagtcgactgccaagaaggagcccgctaagaagtcgacctca
aagagttcctcggccaggaagagcactgcgaagaaggcgccggccaagaagagcgcgtag

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