Dietzia sp. DQ12-45-1b: GJR88_04235
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Entry
GJR88_04235 CDS
T11395
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
did Dietzia sp. DQ12-45-1b
Pathway
did03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
did00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GJR88_04235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
did03400
]
GJR88_04235
DNA repair and recombination proteins [BR:
did03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GJR88_04235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
HC2
YL1
CIS_TMP
Glypican
Motif
Other DBs
NCBI-ProteinID:
QGW25785
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All DBs
Position
complement(2899898..2900917)
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AA seq
339 aa
AA seq
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MRSIWKGEVSFGLVNVPVKVYSATEDHDLRARQVDKKDGVRIRYKRVRDDNGEEVEYSDI
AKAYESDDGETVILTKDELASLPVEQNHEIEVTEFVPADQVDPVAFDNAYFLEPASRSNR
AYVLMREALESTDRLAICTFTLRNRTRLCALRVYKDVLMLQTLLWPDEIRPAILEGLDKE
AKVRPQEVKMAASLIETMAADFEPEKYEDDYQNQLKELIEAKAAGGEAFTVEEREEASDD
DGDDEVADLLAALRASVKDRGGEADDESDDDEDSGSGKKSSAKKSNSSSAKKTATKKAPA
KKAAAKKSTAKKEPAKKSTSKSSSARKSTAKKAPAKKSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccatctggaagggcgaggtctcctttggtctggtgaacgtgccggtcaaggtg
tattcggcgaccgaggaccacgatctgcgcgcgcggcaggtggacaagaaggacggggtg
cggatccgctacaagcgggtgcgggacgacaacggcgaggaggtcgagtactccgacatc
gccaaggcgtacgagtccgacgacggcgagacggtgatcctcaccaaagatgagttggcg
tcgctgccggtggaacagaaccacgagatcgaggtgacggagttcgtcccggccgatcag
gtggatccggtggcctttgacaacgcctacttcctggagccggcgtcacgctccaaccgg
gcgtatgtgttgatgcgagaggcgctggagtccacggaccggttggcgatctgcacgttc
acgctgcgcaaccgcacccggttgtgtgcgctgcgggtgtacaaggacgtgctgatgctc
cagacgctgctgtggccggatgagatccgcccggcgatcctggagggcctggacaaagag
gccaaggtccggccgcaggaggtcaagatggcggcctcgctgatcgagaccatggccgcg
gatttcgagcccgagaagtacgaggacgactaccagaatcagctcaaggagctcatcgag
gccaaggccgccggcggggaggcgttcaccgtggaggagcgcgaggaggctagcgacgac
gacggcgacgacgaggttgccgacctgctcgccgccctgcgcgcgagcgtgaaggatcgc
gggggcgaggcggacgacgagtccgacgacgacgaggattccggctcggggaagaagtcg
tccgcaaagaagagcaactcgagctcggccaagaagacggcaaccaagaaggctcccgcc
aagaaggcagcggctaagaagtcgactgccaagaaggagcccgctaagaagtcgacctca
aagagttcctcggccaggaagagcactgcgaagaaggcgccggccaagaagagcgcgtag
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