Dietzia sp. DQ12-45-1b: GJR88_04423
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Entry
GJR88_04423 CDS
T11395
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
did Dietzia sp. DQ12-45-1b
Pathway
did03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
did00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJR88_04423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
did03019
]
GJR88_04423
03110 Chaperones and folding catalysts [BR:
did03110
]
GJR88_04423
03029 Mitochondrial biogenesis [BR:
did03029
]
GJR88_04423
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
did04147
]
GJR88_04423
Enzymes [BR:
did01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GJR88_04423
Messenger RNA biogenesis [BR:
did03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GJR88_04423
Chaperones and folding catalysts [BR:
did03110
]
Heat shock proteins
HSP60 / Chaperonin
GJR88_04423
Mitochondrial biogenesis [BR:
did03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GJR88_04423
Exosome [BR:
did04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GJR88_04423
Exosomal proteins of other body fluids (saliva and urine)
GJR88_04423
Exosomal proteins of breast cancer cells
GJR88_04423
Exosomal proteins of colorectal cancer cells
GJR88_04423
Exosomal proteins of bladder cancer cells
GJR88_04423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QGW25904
LinkDB
All DBs
Position
complement(3018836..3020458)
Genome browser
AA seq
540 aa
AA seq
DB search
MAKMIAFDEEARRGLESGLNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMGIKRGIE
KAVEAVTAHLIDSAKEIETKEQIAATAGISAADPAIGELIAQAMDKVGKEGVITVEESQT
FGLDLELTEGMRFDKGYISQYFMTDPERQEAVMEDPYVLLVSGKVSTVKDLLPLLEKVIG
EGKSLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIS
EEVGLSLETADISMLGKARKVVVTKDETTIVEGSGDQAQIEGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALVKS
EVAVDGLSLEGEEATGAKIVKFALSAPLKQIAFNAGLEPGVVAEKVRSLPGAQGLNAATG
EYQDLLEAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEPAAPAMPGGDEMGGMGF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgatcgcgttcgatgaagaggcccgccgcggcttggagagcggtctcaac
cagctcgccgacgccgtgaaggtcacgctcggccccaaggggcgcaacgtcgtgctggag
aagaagtggggcgcccccacgatcaccaacgacggcgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggtgcggagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgcgggcgacggcaccaccaccgccaccgtcctggcccaggcactcgtgcgc
gagggcctgcgcaacgtggccgccggtgccaaccccatgggcatcaagcgcgggatcgag
aaggccgtcgaggccgtcaccgcgcacctgatcgactccgccaaggagatcgagaccaag
gagcagatcgccgcgaccgccggcatctccgccgccgacccggcgatcggcgagctcatc
gcgcaggcgatggacaaggtcggcaaggagggcgtgatcacggtcgaggagtcccagacc
ttcggcctggatctcgagctcaccgagggtatgcgcttcgacaagggctacatctcgcag
tacttcatgacggatcccgagcgccaggaggcggtcatggaggatccgtacgtcctgctg
gtctcgggcaaggtctccaccgtcaaggacctcctcccgctgctggagaaggtcatcggc
gagggcaagtccctgctcatcatcgccgaggacgtcgagggtgaggcgctgtccaccctc
gtcgtcaacaagatccgcggaaccttcaagtccgtcgccgtgaaggctccgggcttcggc
gaccggcgcaaggccatgctgcaggacatcgcgatcctcaccggcgggcaggtcatctcc
gaggaggtcggcctgtcgctcgagaccgctgacatctcgatgctcggcaaggcgcgcaag
gtcgtcgtgaccaaggacgagaccaccatcgtcgagggctcgggagaccaggcccagatc
gagggacgggtcaaccagatccgcgccgagatcgagaactccgactcggattacgatcgg
gagaagctccaggagcgtctcgcgaagctcgccggcggcgtcgccgtgatcaaggcgggc
gccgccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgcggtccgcaac
gccaaggccgcggtcgaggagggcatcgtcgccggcggcggcgtcgccctggtcaagtcc
gaggtcgccgtcgacggcctgtccctcgagggcgaggaggccaccggcgcgaagatcgtc
aagttcgcgctgagcgccccgctcaagcagatcgccttcaacgccggcctcgagcccggc
gtcgtggcggagaaggtccgcagcctcccgggtgcccagggcctcaacgcggccaccggc
gagtaccaggacctgctggaggccggcatcaacgacccggtcaaggtgacccgctccgcg
ctgcagaacgccgcctccatcgcggcgctcttcctcaccacggaggccgtcgtggccgac
aagcccgagcccgccgcgcccgcgatgccgggtggcgacgagatgggtggcatgggcttc
tag
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integrated database retrieval system
