Diaphorobacter sp. HDW4A: G7047_01215
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Entry
G7047_01215 CDS
T06499
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dih
Diaphorobacter sp. HDW4A
Pathway
dih03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
G7047_01215 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dih03019
]
G7047_01215 (rnc)
03009 Ribosome biogenesis [BR:
dih03009
]
G7047_01215 (rnc)
03036 Chromosome and associated proteins [BR:
dih03036
]
G7047_01215 (rnc)
Enzymes [BR:
dih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
G7047_01215 (rnc)
Messenger RNA biogenesis [BR:
dih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G7047_01215 (rnc)
Ribosome biogenesis [BR:
dih03009
]
Eukaryotic type
90S particles
RNase
G7047_01215 (rnc)
Prokaryotic type
rRNA processing factors
G7047_01215 (rnc)
Chromosome and associated proteins [BR:
dih03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
G7047_01215 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
RM44_endonuclase
dsrm
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
QIL78693
LinkDB
All DBs
Position
270126..270812
Genome browser
AA seq
228 aa
AA seq
DB search
MLSTELQALQDRLQHSFKTPALLQRAVTHRSFTADHNERLEFLGDSVLSLAVSTMLYQRL
RDLPEGDLSRMRANLVKQDSLHRIAMRLKLSDVLRLGEGESKSGGKLRPSILADAVEALI
GAVYLDADFETAQALVHRFFEGVDLSPEKQAAAKDSKTALQEWLQGRKMHLPQYRVVGTA
GAAHNQIFDVEGHIVELGLIEHGKGGSRRAAEQAAAGALLAKLKAKHA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgttatcaactgaacttcaagctctgcaggatcgtctgcagcattccttcaagaccccc
gcactgttgcagcgcgcggtcacgcatcgcagttttaccgcagatcacaacgaacgcctc
gagtttctcggcgattcggtgctgagtctggcggtctccaccatgctgtatcagcgcctt
cgggatcttcccgaaggtgatctttcgcgcatgcgtgcgaatctggtcaagcaggattcc
cttcaccgcatcgcgatgcgtttgaaactctcggacgtgttgcgtctgggcgaaggggaa
tccaaatccggcggcaaactgcgcccctcgattctggccgatgcggtggaagcgctgatc
ggcgcggtctacctcgatgccgatttcgagactgcgcaggcgctggtgcatcgctttttc
gagggtgttgacctgagccccgaaaagcaggccgccgccaaggattccaagaccgccttg
caggagtggctgcagggtcgcaaaatgcatctgcctcagtaccgcgtagtgggaacggcg
ggcgctgcacacaatcagatcttcgacgtcgaaggtcacattgtggaactcggtctgatc
gaacacggaaagggcggatcacgccgcgcggctgaacaggctgctgcaggtgctctgctt
gccaaactgaaagcaaaacacgcatga
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