Diaphorobacter sp. HDW4A: G7047_04500
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Entry
G7047_04500 CDS
T06499
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dih
Diaphorobacter sp. HDW4A
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dih03009
]
G7047_04500 (rimO)
Enzymes [BR:
dih01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G7047_04500 (rimO)
Ribosome biogenesis [BR:
dih03009
]
Prokaryotic type
ribosomal protein modification factors
G7047_04500 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
QIL79246
UniProt:
A0A6G8CLI2
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All DBs
Position
1001440..1002834
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AA seq
464 aa
AA seq
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MSETASPTKTPKVGFVSLGCPKALTDSELILTQLSAEGYETSKTFQGADLVIVNTCGFID
DAVKESLDTIGEALAENGKVIVTGCLGAKTGKAGGDNLIREVHPSVLAVTGPHATDEVMN
AVHQYLPKPHDPFVDLVPGAFGSAGIKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVS
RPIGDVLKEAKALFEGGVKELLVISQDTSAFGVDVKYRTGFWDGKPVKTRMLELVQTLGE
IAKPYGAWVRLHYVYPYPSVDEVIPLMATGAVLPYLDVPLQHSHPDVLKRMKRPASGERN
LERIQRWREICPEIVIRSTFIAGFPGETEEEFQHLLDFIREAQIDRAGCFAYSDVEGAAA
NELPGMLPLEVREERRSRFMAVAEEVSIARLQRRIGQTMQVLVDKSIALGKKGGVGRTYA
DAPEIDAVVHLLPPEKISKTYKVGEFTKVRIVGTQGHDLVGLPI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacagcgtcccccacgaaaacccccaaagtcggcttcgtcagcctcggatgc
ccgaaggctttgaccgacagcgaattgatcctcacgcaactgagtgccgagggttatgaa
acgtccaagaccttccagggcgcggaccttgtgatcgtcaacacctgtggcttcatcgat
gatgcggtcaaggaaagtctggacaccattggcgaggcgctggccgagaacggcaaggtg
atcgtcaccggctgtctgggagccaagactggcaaggccggtggcgacaacctgattcgc
gaggtgcaccctagcgtgctggccgtgaccgggccgcatgccaccgacgaggtgatgaat
gccgtgcaccagtacctgcccaagccgcatgatccgttcgttgatctggtgccgggtgca
tttggctcggctggcatcaagctcacccccaagcattacgcctacttgaagatcagcgaa
ggctgtaaccaccgctgcacgttctgcatcatcccgtcgatgcgcggcgatctggtgtcg
cgtccgattggcgatgtgctcaaggaagccaaggcgctgtttgaaggcggggtgaaggag
ttgctggtgatcagccaggacacctcggcctttggtgtggatgtgaagtaccgcaccgga
ttctgggatggcaagcccgtcaagacgcgcatgctggagctggtccagacgctgggagag
atcgccaagccgtatggcgcgtgggtgcgtctgcactatgtgtatccgtatccgagcgtg
gacgaggtgattccgctgatggccacgggcgcggtgctgccgtatctggatgtgccactg
cagcacagccaccctgatgtgctcaagcgcatgaagcgccccgccagcggcgagcgcaat
ctggagcgcatccagcgctggcgcgagatctgcccggaaatcgtgatccgcagcactttc
atcgctggttttccgggtgagacggaagaagaattccagcatctgctcgatttcatccgt
gaagcgcagatcgaccgcgcaggttgctttgcctacagcgacgtcgaaggtgcagccgcc
aacgaactgcccggcatgctgccgctggaagtgcgcgaggaacgccgctcgcgcttcatg
gccgtggctgaagaggtgtcgattgcacgcctgcagcgccgcattggccagaccatgcag
gtgcttgtggacaagtccatcgctttgggcaagaagggcggtgtcggtcgtacctatgct
gatgcgcccgaaatcgacgcggtcgtgcacctgctgccgcccgagaagatcagcaagacc
tacaaggtgggtgagttcaccaaggtgcgcattgttggcactcaaggccatgatctggtc
ggactgccgatctga
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