KEGG   Diaphorobacter sp. HDW4A: G7047_07160
Entry
G7047_07160       CDS       T06499                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
dih  Diaphorobacter sp. HDW4A
Pathway
dih03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dih00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G7047_07160 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dih02044]
    G7047_07160 (tssH)
Secretion system [BR:dih02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   G7047_07160 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 Clp_N Sigma54_activat AAA_7 NBD_SMAX1 AAA_14 nSTAND3 AAA_25 TniB Zeta_toxin ATPase_2 DUF815 IstB_IS21 SRP54 Hpr_kinase_C Effector_1
Other DBs
NCBI-ProteinID: QIL79707
LinkDB
Position
1599237..1602023
AA seq 928 aa
MSEISRNHLFGKLNTQMFRAAEAATVTCKLRGNPYVELVHWVHQIVQDQDSDFRQILKHY
QLNPATLEKDITAELDRLPRGATAIVDFSEHIDTAIERAWIYATLLYGDDVIRGGYLLVG
LLKTTNLRAVLHRMSPEFRKLQPDGVAADLVQIIKSSPEENQPASDGSGMSGGAQAGEAS
QAVGSASGGKGSALKKYAVDLTEKARQGQLDPITGRDDEIRQIIDILLRRRQNNPLLTGE
AGVGKTAVVEGFAARVVANDVPPPLRDVSVYTLDVGLLQAGASMKGEFEQRLRQVIDEVQ
ASPGKIILFIDEIHTLVGAGGAQGTGDAANLLKPALARGNLRTIGATTWAEYKKYIEKDP
ALTRRFQTILINEPSEDKAVAMLRGVTAQMESHHKVLILDRAIESAVQLSHRYIPARQLP
DKAVSLLDTACARVSLTQHATPVQVEAIEREMSLLNTEREILLREESIGIGHAERAGQIA
KRLDELSTLLKEHQLRWEAEHVLVQKVFELRKKLNPQAALGSLSPLPHLQESEAAAASIA
NTAAAAHAVEQIADAVEAPLELSDEERVALKQELEAAQSELQQLQGEHPLVLPAVDEQAV
ATVVSEWTGIPVGRMVKDEIAAVLRLADTLGKRVIGQDHSLNTIAQRIQISRAQVEDASK
PIGVFMLVGPSGVGKTETALALAESLYGGEQNLITINMSEFQEAHTVSTLKGAPPGYVGY
GEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGFMEDGEGRLIDFKNTVIIL
TSNVGTDLIMSMCSDPDLLPDSTSLATSMREPLLKVFPAAFLGRLTVVPYYPLAPDMLAR
IVALKLGHIKRRVSDNHQISFEWDKPAVDAIMSRATDIESGGRMVDAILSNHVLAGISRE
ILHRTMNGEPLHSVTLTAKDKDLSLEFA
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgtcagaaattagtcgtaaccatctgtttggaaagctcaacacgcagatgttccgggca
gccgaagctgcaacggtgacgtgcaaactgcgcggcaacccttatgtggagctggtgcat
tgggtgcatcagatcgtgcaggaccaagactcggatttccgccagattctcaagcactac
cagctcaacccggcgacgctggaaaaagacatcactgccgaactcgaccgcctgccgcgg
ggtgcgacggccatcgtcgacttttctgagcacatcgacaccgcgatcgagcgcgcctgg
atctacgcgacgctgctgtatggtgacgatgtgatccgcggcggctatctgctggtgggt
ctgctcaagaccaccaatctgcgcgcggtgctgcaccgtatgtcacccgaattccgcaag
ctccagcccgatggggtggccgccgatctggtgcagatcatcaagtcctcgcccgaagag
aatcagccggctagtgacggcagcggcatgtccggtggcgcgcaggccggcgaggccagt
caggccgtgggcagcgccagcggcggcaagggcagtgcgctcaagaaatatgcggtggat
ttgactgagaaggcgcgccagggtcagcttgatccgatcaccgggcgcgacgacgagatc
cgccagatcatcgacatcctgctgcgccgccgccagaacaaccctttgctgaccggcgag
gcgggcgtgggcaagacggcggtggtggaggggtttgccgcccgtgtggtggccaatgat
gtgccgccgccgctgcgcgacgtgtcggtctacacgctcgacgtaggcctgctgcaggca
ggcgcgagcatgaagggcgagttcgagcagcgcctgcgccaggtgatcgacgaggtgcag
gccagccccggcaagatcattctgttcatcgatgaaatccacacgctggtgggcgcgggc
ggtgcacagggcacgggcgatgcggccaatctgctcaagccggcgctggcgcgcggcaat
ctgcgcaccatcggcgcgacgacctgggccgaatacaagaaatacatcgagaaggacccg
gcgctcacgcggcgcttccagaccattctgatcaacgagcccagcgaggacaaggccgtg
gcgatgctgcgcggtgtgaccgcgcagatggagtcccaccacaaggtgctgattctggac
cgcgccatcgagtccgccgtgcagctctcgcaccgctatatccccgcgcgccagctgccc
gacaaggcggtgagtctgctggacacggcctgtgcgcgcgtctcgctcacgcagcacgcg
acgccggtgcaggtcgaggccatcgaacgcgagatgagtctgctgaacaccgagcgcgag
attctgttgcgcgaagagtccatcggcatcggccatgcggaacgtgcaggccagatcgcc
aagcggctggacgagctgagcacgctgctcaaggaacaccagttgcgctgggaggccgag
catgtgctggtgcagaaggtcttcgagctgcgcaagaagctgaacccgcaggcggcgctg
ggcagcctgtcgcctctgccgcatctgcaggaaagcgaagccgccgccgcaagcatcgcc
aacaccgcagcggccgctcacgctgttgagcagatcgccgatgcagtggaggctccgttg
gagttgagcgatgaggaacgcgtcgcgctcaagcaggaattggaggccgcgcaaagcgag
ctgcagcagttgcagggcgagcacccgctggtgttgcccgccgtggacgagcaggccgtg
gcgaccgtggtgtccgagtggaccggcattcccgtgggccgcatggtcaaggacgagatc
gccgccgtgctgcgtctcgccgacacgctgggcaagcgcgtgatcgggcaggaccacagc
ctgaacaccatcgcccagcgcatccagatttcgcgtgcgcaggtcgaagatgcgtccaag
cccatcggcgtgttcatgctggtcggcccaagcggcgtcggcaagaccgagaccgcgctg
gcgctggccgagtcgctctatggcggcgagcagaacctcatcaccatcaacatgagcgag
tttcaggaagcgcacacggtctcgaccctgaagggtgcgccacccggttacgtgggctac
ggcgaaggcggtgtgctgaccgaggccgtgcgccgcaagccctacagcgtggtgctgctc
gacgaggtggagaaggcccacccggacgtgcacgagatcttcttccaggtgttcgacaag
gggttcatggaagacggcgaagggcggctcatcgacttcaagaacacggtgatcatcctg
acctcgaacgtcggcaccgatctcatcatgagcatgtgcagcgatcccgatctgctaccc
gattcgacctcgctcgccacgtcaatgcgcgagccgctgctcaaggtgttccccgcagcg
tttctcggtcgtctgaccgtcgtgccgtactatccgctcgcgcccgacatgctggcgcgc
atcgttgcgctcaagctcggccacatcaagcgccgggtgtcggacaaccaccagatctcg
ttcgagtgggacaagcctgctgtggacgcgatcatgtcgcgcgcgaccgacatcgaatcg
ggtggccgcatggtcgacgcgatcctctccaatcacgtgcttgcaggcatcagtcgcgag
attttgcatcgcaccatgaacggcgagccactgcattcagtgacgctcaccgccaaggac
aaggacctgtcgcttgaattcgcctga

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