Diaphorobacter sp. HDW4A: G7047_07350
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Entry
G7047_07350 CDS
T06499
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dih
Diaphorobacter sp. HDW4A
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dih03400
]
G7047_07350
Enzymes [BR:
dih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7047_07350
DNA repair and recombination proteins [BR:
dih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
G7047_07350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
RecD_N
Motif
Other DBs
NCBI-ProteinID:
QIL79739
UniProt:
A0A6G8CLI6
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All DBs
Position
1640096..1642654
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AA seq
852 aa
AA seq
DB search
MTVIATNNLVADGWKRVLTRVAEEAGKRGVHPASVVVLVPYAQLMAQAQKQWAALFPDGF
MPRFETTRNWATMLGAEPPSGSGFQLDVACDALTGRSLLEAAGFGAQTDAMLGLMLEMAQ
QLSALAASVAPGEREAWAETARTHLGLPLSAEALQLEAAAAKVALEWVLATAPATDVLFG
EGVRNSVHMLVALEGFHPDPLAKTLLVHWSDAGFAVSLPEAFSGALSEPAQRVALHEALD
AEDEAQLAAACVMQHLADGHVPVALAATDRALTRRIVALLVEACVPVKDENGWTLSTTRK
AAQIMVTLRAAAWHAASDDVLDWLKHLPPETVPALPQLERWLRGLGVRQWSHARKYEPRN
KPEVSALCEQIDAWRGELKGAKTLTQWLLSLRSQLQQTGSWDELTTDPAGAKVLAELRLP
EGLEADLELLSGSERRMGLSQFNNWANDVMEAGRFRPDSERDSPVIVLPMPQLLARPFNA
LVLPGCDEKRMLTAPEPPGSWTRTQREDLGLPTREQSEAAQRAAWAQAMRVPHVDILWRT
SDEGGEPLLASPLVLALELDAGGRAGSDARVAREVPVQLLEMPAPSAAVLPVLKLSSSAY
SDLRHCPYRFYALRQLRLQEADELDAEVDKRDFGTWLHATLQHFHVALVERPTDDADERC
ALMDESAARATRELHLDEGDFLPFSAGWPALRDGYLRWLTRHEQEGASFKVAEHDATQPL
GHLTLVGKLDRIDVTRPGGSGEPVRLVIDYKTENEQVTRKRIVAGSEDIQLAFYAALLQD
DVLRAAYVNVGERGETRTFEQEDVVHLRDELVAGILSDMARIDDGAQMPALGEGAVCGYC
AARGLCRKDFWA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaatagcgacaaacaatctggtggccgacggctggaagcgcgtgttgacgcgt
gtggcggaggaagcaggaaagcgcggcgtgcatccggcgagcgtcgtagtgcttgttccg
tatgcgcaactgatggcgcaggcgcaaaagcaatgggccgcgctgtttcccgacggcttc
atgccgcgtttcgagactacccgcaactgggcgaccatgctgggcgcggagccaccttcg
ggcagcggctttcagctcgatgtggcctgcgacgcgctgaccggacgcagcctgctggag
gcggcgggctttggcgcgcagactgacgcgatgctcggcctgatgcttgagatggcgcag
cagttgtccgcgctcgcagcgtcagtcgcgcccggcgagcgcgaggcctgggccgagacg
gcacgcacgcatctgggtcttcccctgtctgcagaggcgttgcagctcgaagcggccgcc
gccaaggtggcgctcgaatgggtgcttgccacggctcccgctaccgatgtgttgtttggc
gagggcgtgcgcaattccgtacacatgctggtcgcgcttgagggctttcatcccgatccg
ttggccaagaccttgctcgtgcattggagcgatgcggggtttgccgtgtcgctgcccgaa
gcgttttccggtgcactgtccgaacccgcacaacgggtggccttgcacgaagcattggac
gccgaagacgaggcgcaactggccgccgcctgcgtgatgcagcatctggccgacgggcat
gtgccggtcgcactcgccgcgacggaccgcgcgctcacgcggcgcatcgtcgcgttgctg
gtcgaggcgtgcgtgcccgtcaaggacgagaacggctggacgctgtcgaccacccgcaag
gctgcgcagatcatggtgacgttgcgcgccgccgcgtggcatgccgcgagcgacgatgtg
ctcgactggctcaagcatctgccgcccgaaaccgtgcccgcgctgccgcaactggagcgt
tggctgcgtggcttgggtgtgcggcaatggagccatgcgcgcaaatacgaaccgaggaac
aagccggaggtctcggcgttgtgcgagcaaatcgatgcctggcgcggtgagctcaagggc
gcgaagacgctgacccaatggctgctgtcgctgcgcagccaattgcagcagacgggtagc
tgggacgagctgactaccgaccccgcaggcgcgaaggtgcttgccgagctgcgtctgccc
gaagggctggaggccgaccttgaactgctcagtggatcggagcggcgcatggggctttcg
cagttcaacaactgggccaacgatgtgatggaggccgggcgtttccgaccggattccgaa
cgtgattcacccgtcatcgtgctgccgatgccgcagttgcttgcgcgtccgttcaacgcg
ctggtgctgcccggctgcgacgagaaacgcatgttgacggcacccgagccaccgggctca
tggacccgcacgcaacgtgaggatctgggcctgcccacgcgcgaacagtccgaggcggct
cagcgcgcggcttgggcgcaggcgatgcgtgtgccgcatgtcgatattctctggcgcacc
agcgacgaaggcggtgaaccgctgcttgcgagtccgctggtgctggcgttggaactggat
gcgggcgggcgcgcaggtagcgacgcacgcgtggcgcgcgaagtgccggtgcaactgctg
gaaatgcccgcgccatcggctgcagtgctgccggtgctcaagctgtcgtcctccgcatac
tccgatctgcggcattgtccgtatcgcttctatgctttgcgtcagctgcgcctgcaggag
gccgatgagctcgatgccgaggtcgacaagcgcgacttcggcacttggctgcatgcgact
ctgcagcactttcatgtggcgttggtcgagcggcccaccgacgacgctgatgagcgctgc
gcgctgatggacgagagcgcagcccgcgccacgcgcgagctgcatctggacgagggcgac
tttctgccgttctctgcggggtggcccgcgctgcgcgacggttatctgcgctggttgacc
aggcacgagcaggagggcgcgagcttcaaggtggccgagcatgacgcgacgcagccgctc
gggcatctcacgctggtcggcaagcttgaccgcattgacgtgacgcggcccggcggcagt
ggcgagccggtgcgtctggtgatcgactacaagaccgagaacgagcaggtcacgcgcaag
cgcatcgtggccggatcggaagatatacagctcgcgttctacgccgcgctgctgcaggac
gatgtgctgcgcgcggcctatgtgaacgtgggcgaacgcggcgagacgcgcacgttcgag
caggaggacgtggtgcatctgcgcgatgagctggtggcgggcattctgagcgacatggcg
cgcatcgacgatggcgcgcagatgcctgcactcggcgaaggcgcggtctgcggatattgc
gcggcgcgcggtctgtgtcgcaaggatttctgggcatga
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