Diaphorobacter sp. HDW4A: G7047_11640
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Entry
G7047_11640 CDS
T06499
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dih
Diaphorobacter sp. HDW4A
Pathway
dih03030
DNA replication
dih03430
Mismatch repair
dih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7047_11640 (dnaE)
03430 Mismatch repair
G7047_11640 (dnaE)
03440 Homologous recombination
G7047_11640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dih03032
]
G7047_11640 (dnaE)
03400 DNA repair and recombination proteins [BR:
dih03400
]
G7047_11640 (dnaE)
Enzymes [BR:
dih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7047_11640 (dnaE)
DNA replication proteins [BR:
dih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7047_11640 (dnaE)
DNA repair and recombination proteins [BR:
dih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7047_11640 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QIL80482
LinkDB
All DBs
Position
complement(2573731..2577276)
Genome browser
AA seq
1181 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTTRVDDIIKAAVKDGQPAMGLTDLNNMFGGVKFYKAARGKGLKP
VIGTEISVPMEGDGAPFARMILLIQSNQGYFSLSEILARAWTSNVVKNVPLVKWEWLEEL
NDGLIALSGAQAGPVGQPLMRGDEASAMDQALRLARIFPHRFYMEIQRAGRSDDESHLVQ
AVQLAARMNLPVVATHPIQFATADDYEAHEARVCIAEGEILGNQRRIRKFTREQYFKTAA
EMEALFADLPTAVENTLEIAKRCNLTLVLGKPRLPDFPTPNGMPIDDYFRYASYQGLEER
LIYLFPNEAKRDKERPRYVERLEFELHTILQMGFPGYFLIVGDFIQWAKNNGCPVGPGRG
SGAGSLVAYALKITDLDPLQYALLFERFLNPERVSMPDFDIDFCQGNRDRVIDYVKQKYG
KNAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGMSYTLAYPPEQKKEG
DKNNYALELEPLLYDRVRNEEDVRTVIEMAQKLEGTTRSIGMHAGGVVIAPGKLTDFCPL
YQQPGSDSAVAMYDKDDVEDVGLVKFDFLGLATLTILEIAREFIQKRHKGKENFAFEDIP
LDDARTYDLFSVGKTEAVFQFESRGMQGMLKEAKPSRLEDLIALNALYRPGPMDLIPSFV
NRKHGKEVVEYPHPLVENVLSETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKV
EEMVKHRGIFREGAAKNGITEQKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVH
YTAEFYCGNMTVEMDDTDKLKVLYEDAVKNFGMTFEPPDVNRGMYRFEPVTDKVIRYGLG
AIKGTGQSAIEAIIAAREGKGEGPQGHVQGPFTSLFDFCVRVDRSRINKRTVEALIKAGA
FDAIQMNRAALSASLDTAFEFATATHANANQCGLFDMMGDDAQGSSTKEPELADVLPWGI
KERLTQEKTAIGFYLSGHLFDEVALEVRKFVRTPIDELQDNREVQTIAGIVTDYRVINGQ
RGKLALFKIDDKTKVLEASADEGVINASMPIRDDDLIVVAGRLQLDHFSGGLRVKVLQVS
DLAGARAKYGKYLRVKVQDEVPDVGAIVREFPPKVESTEHGETLRRGLRVRLDMKIQSDR
GAAVAELNLGEASSFFPTDAALAAWSSMAGSEAVSVVYDHG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacttgcgcctacacaccgaattttccgtggtcgacggaaccacccgggtc
gacgacatcatcaaggcggccgtcaaggatggccagcctgcgatgggacttaccgatctg
aacaatatgtttgggggcgtgaagttctacaaggctgcgcgcggcaaggggctcaagccc
gtgatcggcacagagatcagcgtacccatggagggcgacggtgccccgttcgcgcggatg
attctgctgatccagagcaatcagggctatttcagcctatcggaaatcctcgcccgcgcc
tggaccagcaacgtcgtgaagaacgttccgctcgtcaaatgggaatggcttgaagagctc
aacgacgggctgatcgcgctttccggcgcgcaggcggggccggtcggccaaccactgatg
cgcggggacgaagcctccgccatggaccaagcgttgcgtctggcgcgcattttcccgcac
cgcttttacatggagatacagcgcgcaggccgcagcgacgacgagtcgcatctcgtgcag
gcggtgcagctcgccgctcgcatgaatctgccagtggtcgccacgcatcccatccagttc
gcgaccgccgacgattacgaggcccacgaggcccgcgtttgcattgcggaaggcgaaatt
ctgggcaaccagcgtcgcatccgcaagttcacgcgtgagcagtatttcaagaccgccgct
gagatggaggcgctgttcgccgacctcccaactgccgtcgagaacacgctggaaatcgcc
aagcgctgcaacttgacgctggtgctcggcaagccgcgtctgccggatttcccgacgccg
aacggcatgccgatcgacgactatttccgctacgcctcgtaccaggggctggaagagcgc
ctgatttatttgtttccgaatgaggccaaacgcgacaaggagcgtccgcgctatgtggag
cgtctcgagtttgagctgcacaccatcctgcagatgggatttcccggctacttcctgatc
gtgggcgacttcattcaatgggccaagaataatggctgccccgtggggccaggccgtgga
tcgggcgccggttcgctagtagcttacgcgctcaagatcaccgatctggatccgctgcag
tacgcgctgctgttcgagcgtttcctgaatcctgaacgcgtctcgatgcctgacttcgac
atcgacttctgtcagggcaatcgcgaccgcgtgatcgactacgtgaagcagaagtacggc
aagaacgccgtgagccagatcgccaccttcggcacgatggcagccaaggccgccatccgt
gacgtgggccgggtgatggacatgagctacaccttctgcgatggcatctccaaactggtg
ccgggcaagccgggcatgagctatacgctggcctatccgcccgagcagaagaaggagggc
gacaaaaacaactacgcgctcgagctcgaaccgctgctctacgatcgcgtgcgcaacgaa
gaagacgtgcgcaccgtgatcgagatggcgcagaagctcgaaggcacgacccgtagtatc
ggcatgcacgccggtggcgtggtgatcgcgccgggcaagctgaccgatttctgtccgctc
taccagcagccaggcagcgattccgccgtggcgatgtacgacaaggacgacgtggaagac
gtcggcctcgtgaagttcgacttcttgggtctggcgacgttgaccattctcgagatcgcg
cgcgagttcatccagaagcgccacaagggcaaggaaaacttcgcgttcgaggacattccg
ctcgacgacgccagaacctacgacttgttttcggtcggcaagaccgaagccgtgttccag
tttgaatcgcgcggcatgcagggcatgctcaaggaagccaagcccagccgccttgaagac
ctgatcgcgctgaacgccctgtaccgcccaggtcctatggacctgatccccagcttcgtg
aaccgcaagcacggcaaggaagtggtggagtatccgcatccgctggtcgagaacgtgctg
tccgaaacctacggaatcatggtctatcaggagcaggtgatgcagaccgcccaggtgctg
ggtggctactcgctcggcggcgccgacttgctgcgccgcgcgatgggcaagaagaaggtc
gaggagatggtcaagcaccgcggcatcttccgtgagggcgccgccaagaacggcatcacc
gagcagaaggccgacgaggtgttcgacctgatggagaagttcgcgggctacggcttcaac
aagtcgcacgcggccgcttattcgctgctggcctatcacacgggttggctcaaggtgcac
tacacggcggagttctactgcggcaacatgaccgtggaaatggacgataccgacaagctc
aaggtgctctacgaggatgcggtcaagaatttcggcatgaccttcgagccgccggacgtc
aaccggggcatgtaccgcttcgagccggtgaccgacaaggtgatccgctatggcctgggt
gccatcaagggcacggggcagtcggccatcgaagccatcatcgccgcccgtgagggcaag
ggcgagggcccgcagggtcatgtgcaggggcctttcaccagcctgttcgacttctgcgtg
cgtgtggaccgcagccgcatcaacaagcgcacggtcgaggcgctgatcaaggctggcgcg
ttcgacgcgatccagatgaaccgcgcggcgctgtcggcgtcgctcgataccgccttcgaa
ttcgccacggcgacgcatgccaacgccaatcagtgcggcctgttcgacatgatgggcgac
gacgcccaaggctcgagcaccaaggagcccgagctggccgatgtgctgccctggggcatc
aaggagcgcctgacgcaggagaagaccgccatcggtttctacctctcgggccatctgttc
gatgaagtggcgcttgaggtgcgcaagttcgtgcgcacgcccattgacgagctgcaagac
aaccgcgaggtacagactatcgccggaatcgtcacggactatcgcgtcatcaatggtcaa
cgcggcaagttggcgctgttcaagatcgatgacaaaaccaaggtgctcgaggcctcggcg
gacgagggggtgatcaacgcgtccatgccgattcgggacgatgacctgatcgttgtggcc
ggacgtctgcagctcgaccatttcagcggcgggttgcgggtgaaggtgttgcaggtttcc
gatctggccggagcccgcgccaaatatggaaagtatctgcgcgtgaaggtgcaggacgag
gtgccggacgtgggtgccatcgtgcgtgaatttcccccgaaggtagagagcaccgagcat
ggcgaaaccctgcgccggggcctgcgcgtgcggctggacatgaagatccagtctgatcgc
ggcgcggctgtggccgagctcaatctgggcgaggcaagcagcttttttccgaccgacgcg
gcactggccgcgtggagcagcatggcgggttccgaggccgtctccgtggtctacgaccat
gggtga
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