Diaphorobacter sp. HDW4A: G7047_19570
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Entry
G7047_19570 CDS
T06499
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dih
Diaphorobacter sp. HDW4A
Pathway
dih00521
Streptomycin biosynthesis
dih00523
Polyketide sugar unit biosynthesis
dih00525
Acarbose and validamycin biosynthesis
dih00541
Biosynthesis of various nucleotide sugars
dih01055
Biosynthesis of vancomycin group antibiotics
dih01100
Metabolic pathways
dih01110
Biosynthesis of secondary metabolites
dih01250
Biosynthesis of nucleotide sugars
Module
dih_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
G7047_19570 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
G7047_19570 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
G7047_19570 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
G7047_19570 (rfbB)
00525 Acarbose and validamycin biosynthesis
G7047_19570 (rfbB)
Enzymes [BR:
dih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
G7047_19570 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QIL81874
UniProt:
A0A6G8CSS8
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All DBs
Position
complement(4260835..4261911)
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AA seq
358 aa
AA seq
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MILVTGGAGFIGANFVLDWLAVNDEPVVNVDKLTYAGNLQNLQALKGDARHHFVQGDIGD
AALIERLLKEHQPRAVVNFAAESHVDRSIHGPEDFIQTNVVGTFRLLEAVRHHWASLPAV
DKQAFRFLHVSTDEVYGSLKPTDPAFTEDHNYEPNSPYSASKAASDHLVRAWHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLMIVNALAGKPLPVYGDGMQIRDWLYVRDHCSAIRRVLEG
GQLGETYNVGGWNEKPNIEIVNLVCGLLDELRPRADGQSYREQITYVTDRPGHDRRYAID
ARKLERELGWKPAETFETGIRKTVQWYLENTEWVVAVQTGSYRDWISQQYQAQDKASA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgattctggtaactggcggcgcaggtttcattggcgccaatttcgtgctggactggctg
gccgtcaacgacgagcccgtggtcaacgtcgacaagctcacctacgcgggcaatctgcag
aacctgcaggcactcaagggcgatgcgcgccatcactttgttcagggcgatatcggggac
gcggcgctgatcgagcgcctgctcaaggagcaccagccgcgcgccgtcgtgaactttgcg
gccgagtcgcatgtggaccgctcgatccacggtccggaagacttcatccagaccaatgtg
gttggcactttccgcctgctcgaagccgtgcgtcaccactgggcaagtctgccagccgtc
gacaagcaggcctttcgttttctgcatgtctcgaccgatgaggtctatggctcgctcaag
cccactgatcctgccttcaccgaagaccacaactacgagcccaacagcccgtattcggcg
agcaaggcggcgagcgaccatctggtgcgcgcttggcaccacacctacggcctaccggtg
ctcacgacgaactgcagcaacaactacggcccctaccatttccccgaaaaactgatcccg
ctgatgatcgtgaacgcgctcgcgggcaagccgctgccggtctatggcgacggcatgcag
atccgcgactggctctatgtgcgcgaccactgcagcgccatccgccgggtgcttgaaggc
gggcagctcggcgagacctacaacgtcggcggctggaatgagaagcccaacatcgagatc
gtgaatctggtctgcggcctgctcgacgagctgcgcccacgtgcggacggtcaaagctat
cgcgagcagatcacctacgtcaccgaccgtcccggccatgatcgccgctacgcgatcgac
gcacgcaagctcgagcgcgagctgggatggaagcctgcggaaaccttcgaaaccggcatc
cgcaagaccgtgcagtggtatctggaaaacaccgaatgggtggtggccgtgcagaccggc
tcttaccgcgactggatctctcagcagtaccaagcgcaggacaaggcgtcggcatga
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