Diaphorobacter sp. HDW4A: G7047_23280
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Entry
G7047_23280 CDS
T06499
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dih
Diaphorobacter sp. HDW4A
Pathway
dih03420
Nucleotide excision repair
dih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G7047_23280
03430 Mismatch repair
G7047_23280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dih03400
]
G7047_23280
Enzymes [BR:
dih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7047_23280
DNA repair and recombination proteins [BR:
dih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7047_23280
MMR (mismatch excision repair)
Other MMR factors
G7047_23280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIL82531
UniProt:
A0A6G8CUJ5
LinkDB
All DBs
Position
5070891..5072888
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AA seq
665 aa
AA seq
DB search
MSQPASTPARFAPKVITPSDEQRAIQVASERTIIVEANAGAAKTTTLALRVAESLARGVP
THRIIALTHTQPACVALQRTLLQIGVARNDVGQLRIQTFEDFSKDILKGIDDHRVDYVDE
NEQLRTYFWDAVQRVEEDESERWRDELSMPAIGDSWFVEEFLKINTRLKGTMRDVLERDG
TRVSPEYAESIGIDYTQLRVYLAYERIRRQENADTPKFRGEADATYDLARHFVDGENVQG
LRNWPFTAQIVLIDEMHDLNFAMFRVLVEILNTSKSFFCGMGDVDQVVHEATGADAVFMK
NAIEEHTSRAIKRYPLTHSYRFGKSLAAKAGRVANKPYSSNAAHDTRITLQTFTSNEECA
SLVIDAAKEWKRTRRNMSEFAILLRHPVQSVLMENLLIDNELPYAMSGFESYLKRPEVLF
IRGLMAVATDDMQSLTHEDTREQVLTALHFFSGTRIEVANRPEDSQATLLADAISAVRDN
PMFLTSFFNNQVLRTAEPHLQKRLQAAQQLAATQSGPTFLQDFLKALDIQSIINEAYVSK
DRRAEALSNIEGLQLAASRFNSAFDYFSFLNTLEQKQRDFKDSKRLQIASIVSVKGLEFE
HVLVPHLTQGEFPAANGTSTEERNLFYVAITRAKQQLTLLGHGERGSGFLGRVGGEKKES
TASVE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagcccgccagcacccccgcgcgtttcgcgcccaaagtcatcacgccgtccgat
gagcagcgcgccattcaggtggcgtccgagcgcaccatcatcgtcgaggccaatgcgggc
gcagccaagaccaccacgctcgcgctgcgggtggccgagagccttgcgcgcggcgtgccc
acgcaccggatcatcgcgctcacgcacacgcagccggcctgtgtagcgctgcagcgcacg
ttgctgcagatcggcgtcgcgcgcaatgacgtcggccaactgcgcatccagacctttgaa
gacttcagcaaggacatcctcaaaggcatcgacgaccaccgcgtggactatgtggacgag
aacgagcagctgcgcacgtatttctgggacgctgtgcagcgtgtggaggaggacgaatcc
gaacgctggcgggacgaactgagtatgccggctattggcgacagctggtttgtggaggag
ttcctcaagatcaacacgcgcctcaagggaacgatgcgcgatgtgctcgaacgcgacggc
acgcgcgtaagccccgaatatgccgagagcatcggcatcgactacacgcagctcagggtg
tatctggcctatgagcgcattcgccgtcaggaaaacgccgacacgcccaaattccgaggc
gaggccgatgccacctacgatctggcccgccattttgtcgatggcgaaaacgtccaaggc
ctgcgcaactggccgttcaccgcgcagatcgtgctgatcgatgaaatgcacgacttgaac
ttcgccatgttccgcgtgctggtggaaatcctcaacacatcgaagagctttttctgcggc
atgggcgacgtcgaccaggtggtgcacgaagccaccggcgcagatgccgttttcatgaag
aacgcgattgaagaacacacctcacgcgccatcaaacgctatccactcacgcacagctac
cgcttcggcaaaagcctggccgccaaagccgggcgcgtggccaacaagccctacagctcc
aacgccgcgcacgacacgcgcatcacactgcagacattcacatcgaatgaggaatgcgcc
agccttgtcatcgacgccgccaaggaatggaaacgcacccgccgcaacatgagcgaattc
gccatattgctgcgccaccccgtgcaatccgtgctgatggaaaacctgctcatcgacaac
gaactgccgtatgccatgagcggcttcgaaagctacttgaagcgcccggaggttttgttc
attcgcggcctcatggcggttgccactgacgacatgcaaagcctcacgcacgaagacacg
cgcgagcaggtgctgacggcgctgcacttcttcagcggcacccgcatcgaagtagccaac
cgccccgaagacagccaggccacgctgctcgccgacgccatcagcgccgtgcgcgacaac
ccgatgttcctcacctcgttcttcaacaaccaggtgctgcgcaccgcagaaccccatctg
caaaagcgcttgcaagccgcgcagcaactggctgccacacaaagcggcccaacgtttcta
caagactttctgaaagcgctggacatccaatccatcatcaacgaagcctacgtctccaaa
gaccgccgtgccgaggccctgtcgaacatcgaaggcctgcaactcgctgcgagccggttc
aactcagcgtttgactacttcagttttttgaacacgctggagcagaaacaacgcgacttc
aaagacagcaaacgcctgcagatcgccagcatcgtgagcgtgaaagggctggagttcgaa
cacgtgctcgttccacatctcacgcagggcgagtttcctgcggcgaacgggacttcgacg
gaggagcggaacctgttctatgtggcgatcacgcgggcgaagcagcagttgacgctgctg
gggcatggggagagggggagtgggttcttggggagggtggggggtgaaaagaaggagagc
accgcttcggttgagtag
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