KEGG   Diaphorobacter sp. HDW4A: G7047_25780
Entry
G7047_25780       CDS       T06499                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
dih  Diaphorobacter sp. HDW4A
Pathway
dih03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dih00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    G7047_25780 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dih03400]
    G7047_25780 (uvrA)
DNA repair and recombination proteins [BR:dih03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     G7047_25780 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      G7047_25780 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 AAA_23 nSTAND1 RsgA_GTPase AAA_21 DnaJ_CXXCXGXG nSTAND3 AAA_25 BCA_ABC_TP_C NACHT Viral_helicase1 DUF1924
Other DBs
NCBI-ProteinID: QIL82965
UniProt: A0A6G8CWH6
LinkDB
Position
5648311..5651367
AA seq 1018 aa
MPSKQDKSLPLNPEEAPNGRYLAQSLRERRISIRGARTHNLKNIDLDIPRDQLVVITGLS
GSGKSSLAFDTLYAEGQRRYVESLSTYARQFLGRLDKPDVDLIEGLSPAISIEQKATSHN
PRSTVGTVTEIYDYLRLLYARAGTPFCPDHGLPLSSQTVSQMVDAVLALPEDSRIMLLAP
VARQKKGEFNELFAQMQALGYVRFRVDGTVYEFENLPQLKKTEKHDIDVVIDRLRVREDA
KQRLAESIEAVLRVGGAEGNGRVLVLEMDSEKEHLFSSKFACPVCGYSLPELEPRLFSFN
SPTGACPSCDGIGQQEVFDVARVVAFPSLSLASGAIKGWDRRNGYYFAMLESLARHFGFD
VETPFEELPERVREVLLHGSGTEEIAFSYLIDSGPNKGKPVLRNHPFEGILPNMARRYRE
TDSSVVREDLARYRSTQACPDCHGARLRSEARHVKVGEGDEALAIQQISHRTLSDSLSWF
RNLKLGGAKAEIADKIVREIASRLTFLNDVGLNYLSLDRSAETLSGGEAQRIRLASQIGS
GLTGVMYVLDEPSIGLHQRDNDRLIGTLQHLRDIGNSVIVVEHDEDMIRAADHCVDMGPG
AGVHGGQVMAQGTYDELCAEPKSLTGQYLSGKLSIPVPKRRTPWQPVLESDLPAAPEKAP
KSRFPETPASRRKAERMEVHRATQGRLQALRVNGATGHSLQNVTAEFPVGLLTCVTGVSG
SGKSTLVNDTLYAAVARQLYRAHEEPAPHESIEGIDYFDKCINVDQSPIGRTPRSNPATY
TGLFTPIRELMAETNTARERGYGPGRFSFNVAGGRCEACQGDGVVKVEMHFLPDVYVPCD
VCHGERYNRETLEVLWKGRNIAQILDLTVEDAHAFFKDVPTIARKLQTLLDVGLSYIRLG
QSATTLSGGEAQRVKLAQELSKRDTGRTLYILDEPTTGLHFADIDLLLKVLLQLRDAGNT
IVVIEHNLDVIKTADWVIDMGPEGGAGGGMVVATGTPEEVAQNPASHTGRYLQRYVKG
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgccctccaagcaagacaagtccctgccgttgaatcctgaagaggcccccaacgggcgc
tatctggcgcagtcgctgcgcgagcggcgcatcagcatccgcggcgcgcgcacgcacaac
ctcaagaacatcgacctcgacattccgcgcgatcagcttgtggtgatcacggggctgtcg
ggctcgggcaagtccagccttgcgttcgacacgctctatgccgagggccagcggcgctat
gtggaaagcctctcgacctacgcgcggcagtttctcgggcggctcgacaagcccgatgtc
gatctgatcgagggcctctcgcccgctatcagcatcgagcagaaggccactagccacaac
ccgcgctccacggtgggcacggtcaccgagatctacgactatctgcgcctgctctacgcc
cgtgcgggcacgccgttttgcccggaccacgggctgccgctgtcctcgcagaccgtgagc
cagatggtggatgcggtgctcgcgttgccggaggattcgcgcatcatgctgctggccccg
gtggcgcggcagaagaaaggcgagttcaacgagctgttcgcgcagatgcaggcgctcggc
tatgtgcgctttcgcgtcgacggcacggtctatgaattcgaaaacctgccgcagttgaag
aaaaccgagaagcacgatatcgacgtggtgatcgaccgcctgcgggtgcgcgaagacgcc
aagcagcgcctggccgaaagcatcgaggctgtgctgcgtgtgggcggcgccgaaggcaat
ggccgcgtgctggtgctggagatggattctgaaaaggagcaccttttttcgagcaagttc
gcctgcccggtctgcggctattcgctgcccgaactggagccgcgtctcttttcattcaac
tcgccgaccggtgcctgcccaagctgcgacggcattggccagcaggaagtgttcgacgtg
gcgcgcgtggtggcgtttccctcgctgagtctggccagcggcgcgatcaagggctgggac
cgccgcaacggctactacttcgcgatgctggagagcctggccaggcatttcggcttcgat
gtcgaaacgccgttcgaagaactgcccgagcgcgtgcgcgaggtgctgctgcatggttcg
ggcactgaggaaatcgcgttctcgtacctgatcgacagcggcccgaacaagggcaagccg
gtgctgcgcaaccatccgtttgaaggcattctgccgaacatggcgcggcgttatcgtgag
acggattcgtccgtggtgcgcgaagacctcgcccgctaccgcagcacgcaggcctgcccc
gattgccacggcgcgcgcctgcgcagcgaggcccgccatgtgaaggtgggcgagggcgac
gaggcgctcgcgattcagcagatcagccatcgcacgctgtcggattcgctttcctggttc
cggaacctcaagcttggcggcgccaaggccgagattgccgacaagatcgtgcgcgagatc
gcctcgcgcctgacctttctgaacgacgtggggctgaactatctgagcctcgaccgcagc
gccgaaaccctctcgggcggcgaggcgcagcgcattcgcctggccagccagatcggatcg
ggccttacgggcgtgatgtatgtgctcgacgagcccagcatcggtctgcaccagcgcgac
aacgaccgcctgatcggcacgctgcagcacctgcgcgacatcggcaacagcgtgatcgtg
gtcgagcacgacgaggacatgatccgcgccgccgaccactgcgtggacatggggccgggc
gcgggcgtgcatggcggccaggtgatggcgcagggcacctatgacgagctctgcgccgag
cccaaatcgctcaccggccaatacctttctggcaagctcagcattccggtgcccaagcgc
cgcacgccatggcagccggtgctcgaatccgacctgcctgcagcgcccgagaaggcgcct
aaatcgcgctttcccgaaacccccgcgagccgccgcaaagccgagcgcatggaggtgcac
cgcgccacgcagggccgactgcaggcgctgcgcgtgaacggcgccaccggccacagcctg
cagaacgtgacggcggagttccccgtggggctgctcacctgcgtgaccggcgtctcgggc
tcgggcaagagcacgctggtcaacgacacgctgtacgccgccgtcgcgcgccagctctac
cgcgcgcacgaggaacccgcgccgcacgaatccatcgagggcattgactacttcgacaag
tgcatcaacgtcgaccagtcgcctatcggccgcacgccgcgcagcaatccggcgacctac
accggcctgttcacgccgatccgcgaactcatggccgagaccaacaccgcgcgcgagcgc
ggctacgggccgggccgcttcagcttcaacgtggccggtggccgctgtgaggcctgccag
ggcgacggcgtggtcaaggtggagatgcattttctgcccgacgtctatgtgccgtgtgat
gtctgccacggcgagcgctacaaccgcgaaacgctcgaagtgctctggaagggccggaac
atcgcgcagatcctcgacctcacggtggaggacgcgcacgcctttttcaaggacgtgccg
accatcgcgcgcaagctgcagacgctgctcgacgtggggctgtcctacatccgcctcggt
cagagcgcgaccacgctctcgggcggcgaggcgcagcgcgtgaagcttgcgcaggaactc
tccaagcgcgacacgggccgcacgctctacatcctcgacgaacccacgaccggcctgcat
ttcgccgacatcgacctgctgctcaaggtgttgctgcaactgcgcgacgcgggcaacacc
attgttgtcatcgagcacaacctcgacgtcatcaagaccgctgactgggttatcgacatg
ggcccggaaggcggcgcaggcggcggtatggtggtggccacgggcacgccggaagaagtg
gcgcagaacccggcgagccatacggggcgttatctgcagcggtatgtgaaggggtga

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