Diaphorobacter sp. HDW4A: G7047_28165
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Entry
G7047_28165 CDS
T06499
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dih
Diaphorobacter sp. HDW4A
Pathway
dih02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dih00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
G7047_28165
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dih02022
]
G7047_28165
02035 Bacterial motility proteins [BR:
dih02035
]
G7047_28165
Two-component system [BR:
dih02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
G7047_28165
Bacterial motility proteins [BR:
dih02035
]
Pilus system
Twitching motility proteins
G7047_28165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
HTH_23
AAA
HTH_28
HTH_30
HTH_24
AAA_2
HTH_20
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QIL83392
LinkDB
All DBs
Position
complement(6194432..6195979)
Genome browser
AA seq
515 aa
AA seq
DB search
MPAYAASILVIDDEPDLRTLYELTLLREGYRVETAGSVAEARQQLRVQQFDVVISDMRLP
DGYGMEVLLQLRESQRRERCVVMTAYGSAENAVEALRAGAFDYLTKPVDLKQFRSVVASA
VQGTGGVPAPGQPAASLRVQGTENRPTAENESSTVSPMLRQLIGESEAMRNVKQRIAKVA
RSMAPVLVRGESGTGKELVARALHGSSQRSDGPMIAVNCSAIPENLLEAEFFGARKGSYT
GATADRDGFFQAAQGGTLFLDEIGDLPLAMQSKLLRAIQERSIRPLGATQEETVDVRIVS
ATHKNLAAEVQAGTFRQDLYYRLNVIELLIPPLRERREDLPDLCRALLQRIEQDSGVPVP
RLTGNALRRIAMHPLPGNVRELENLLHRAVALSDGDELFVDPPTASATPEPAPAPAAPTE
PSPLVVKYSDASERAEMLPAGAPPPYPANTALPNDLQAWLDKQERDILVRALRESGFNRT
ATAARLGISLRQIRYRIERLNISEAEGGTDHVESE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcatacgccgcttccatccttgtcattgacgacgaacccgatctgagaacgctc
tacgagctcacgctcctgcgcgagggctatcgcgtcgaaacggccggttcggtggcagag
gcgcgccagcaattgcgcgtgcagcaattcgacgtggtgatctccgacatgcgattgccc
gacggctatggcatggaagtgctcctgcaactgcgtgagtcccagaggcgcgagcgttgc
gtggtgatgaccgcatacggttcagcggaaaatgcggtggaagcgctgcgcgccggagcg
ttcgactatctgaccaagccggtcgatctcaagcagtttcgctcggtagttgcgtccgcc
gtgcagggcacgggcggcgttccggctcccggccaacctgcggccagcctgcgagttcag
ggaacggagaacaggcccaccgccgagaacgaatcatcaacggtgtcgcccatgctgcgc
caattgatcggcgaatccgaagccatgcgcaatgtaaagcagcgcatcgccaaggtagcg
cgcagcatggcgccagtattggtacgcggcgagtccggcaccggcaaagagctggtcgcg
cgcgcgctgcacggcagcagccaacgctccgatggcccgatgatcgcagtgaactgcagc
gccattccagagaatctgctcgaagccgagttcttcggcgcacgcaagggctcatacacc
ggcgcgacggcggatcgcgatggattcttccaggccgcacagggcggcaccctgttcctt
gacgagattggcgatctgccgcttgccatgcagtccaagctgctgcgcgccattcaggag
cgcagcatcaggccgctcggcgcgacacaggaagagaccgtcgatgtgcgcatcgtgagc
gccacgcacaagaaccttgctgccgaggtgcaggccggcacattccgtcaggacttgtac
taccgcctgaatgttatcgaactgctaattccgccgctgcgcgaacgccgcgaggatctg
cccgacctgtgccgcgcgctgctacagcgcatcgagcaggattcgggcgtgcccgtgccc
cgtctcaccggcaacgcactgcgacgcatcgccatgcacccactgccgggcaatgtgcgc
gagctggaaaatctgctgcaccgcgcggtcgcgctcagcgatggcgacgagctgttcgtc
gatccacccactgccagtgcaacgcctgaacctgccccggcgcctgctgcaccgacagag
ccctcacccctcgtggtcaagtacagcgatgcgagcgagcgcgcggagatgctgccggca
ggtgcgccaccgccctatcccgccaacaccgcactgcccaatgacctgcaggcctggctc
gacaagcaggagcgcgacatccttgtgcgtgcgctgcgcgaatccggcttcaaccgcact
gcgacggctgcacgcctgggcattagcctgcgccagatccgctaccgcatcgaacggctg
aacatctccgaggccgaaggcggcacggaccatgtcgaaagcgaataa
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