KEGG   Diaphorobacter sp. JS3050: HND92_00080
Entry
HND92_00080       CDS       T10221                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dij  Diaphorobacter sp. JS3050
Pathway
dij03030  DNA replication
dij03430  Mismatch repair
dij03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dij00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HND92_00080
   03430 Mismatch repair
    HND92_00080
   03440 Homologous recombination
    HND92_00080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dij03032]
    HND92_00080
   03400 DNA repair and recombination proteins [BR:dij03400]
    HND92_00080
Enzymes [BR:dij01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HND92_00080
DNA replication proteins [BR:dij03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HND92_00080
DNA repair and recombination proteins [BR:dij03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HND92_00080
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QJY31520
LinkDB
Position
15618..16274
AA seq 218 aa
MPSAPIAVIDFETTGMMPAQGARATEVAIVLMEGDRVVDRYQSLMRTGVRIPPFITQLTG
ITNAMVEAAPDAAAVMREAARFVGDAPMVAHNAAFDRKFWQAELQYAGLAAPHPFACTVL
LSRRVYPDAPSHSLGRLTDHLGLPRAGRAHRALADAEMAAALLACMQSDLCQRFGLAWPD
HALLMQLQRCARPAIGKLLQHHRQAAPAEQPPTALQMG
NT seq 657 nt   +upstreamnt  +downstreamnt
atgccgtccgcccccatcgccgtcatcgatttcgaaaccaccggcatgatgcctgcccag
ggtgcacgcgccaccgaggtggccatcgtgctcatggaaggcgaccgcgtggtggaccgc
taccagagcctgatgcgcacgggcgtgcggattccgcccttcatcacgcagctcaccggc
atcacgaatgccatggtggaggccgcccccgatgccgccgcagtcatgcgcgaggccgcg
cgcttcgtgggcgacgcgcccatggtggcccacaacgcggcattcgaccgcaagttctgg
caggccgaattgcagtacgccgggctcgccgcgccccatccgttcgcctgcaccgtgctg
ctgtcgcgccgcgtgtaccccgatgcgcccagccacagcctgggccgcctcacagaccac
ctcggcctgccgcgcgccggccgcgcccaccgcgcgctggccgatgcggaaatggccgct
gcgctgctggcctgtatgcagagcgacctgtgccaacgcttcggcctggcctggccggac
cacgcgctgctgatgcagttgcagcgctgcgcacgccctgccatcggcaagctgctgcag
caccaccgccaggccgcgccagccgaacagccgccaacggcgttgcaaatggggtag

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