Diaphorobacter sp. JS3050: HND92_00080
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Entry
HND92_00080 CDS
T10221
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij03030
DNA replication
dij03430
Mismatch repair
dij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HND92_00080
03430 Mismatch repair
HND92_00080
03440 Homologous recombination
HND92_00080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dij03032
]
HND92_00080
03400 DNA repair and recombination proteins [BR:
dij03400
]
HND92_00080
Enzymes [BR:
dij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HND92_00080
DNA replication proteins [BR:
dij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HND92_00080
DNA repair and recombination proteins [BR:
dij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HND92_00080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QJY31520
LinkDB
All DBs
Position
15618..16274
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AA seq
218 aa
AA seq
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MPSAPIAVIDFETTGMMPAQGARATEVAIVLMEGDRVVDRYQSLMRTGVRIPPFITQLTG
ITNAMVEAAPDAAAVMREAARFVGDAPMVAHNAAFDRKFWQAELQYAGLAAPHPFACTVL
LSRRVYPDAPSHSLGRLTDHLGLPRAGRAHRALADAEMAAALLACMQSDLCQRFGLAWPD
HALLMQLQRCARPAIGKLLQHHRQAAPAEQPPTALQMG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcccccatcgccgtcatcgatttcgaaaccaccggcatgatgcctgcccag
ggtgcacgcgccaccgaggtggccatcgtgctcatggaaggcgaccgcgtggtggaccgc
taccagagcctgatgcgcacgggcgtgcggattccgcccttcatcacgcagctcaccggc
atcacgaatgccatggtggaggccgcccccgatgccgccgcagtcatgcgcgaggccgcg
cgcttcgtgggcgacgcgcccatggtggcccacaacgcggcattcgaccgcaagttctgg
caggccgaattgcagtacgccgggctcgccgcgccccatccgttcgcctgcaccgtgctg
ctgtcgcgccgcgtgtaccccgatgcgcccagccacagcctgggccgcctcacagaccac
ctcggcctgccgcgcgccggccgcgcccaccgcgcgctggccgatgcggaaatggccgct
gcgctgctggcctgtatgcagagcgacctgtgccaacgcttcggcctggcctggccggac
cacgcgctgctgatgcagttgcagcgctgcgcacgccctgccatcggcaagctgctgcag
caccaccgccaggccgcgccagccgaacagccgccaacggcgttgcaaatggggtag
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