Diaphorobacter sp. JS3050: HND92_01025
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Entry
HND92_01025 CDS
T10221
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dij Diaphorobacter sp. JS3050
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dij03400
]
HND92_01025 (radA)
DNA repair and recombination proteins [BR:
dij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HND92_01025 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
AAA_22
DnaB_C
ChlI
AAA_16
AAA_30
Lon_C
RecA_N
GvpD_P-loop
NTPase_1
NPHP3_N
nSTAND_NTPase5
nSTAND3
AAA_5
SLFN-g3_helicase
NACHT
AAA_29
AAA_14
DUF7129
AAA
AAA_24
AAA_19
MCM
ATPase_2
DAP3
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
QJY31696
LinkDB
All DBs
Position
232189..233571
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AA seq
460 aa
AA seq
DB search
MAKEKTIFSCTECGGTSPRWLGKCPSCGAWNTLIESVPDAGPGKNRLSGAGQYAGLAQAQ
AVMPLAAIEATEVARTASGIEELDRVLGGGVVEGGVVLIGGDPGIGKSTLLLQAMDALQR
AGLPTLYVTGEESGAQVALRSRRLGLDASQVNVLAEIQLEKILATVEATQPAVCVIDSIQ
TVYSDQLTSAPGSVAQVRECAAHLTRMAKATGIAVILVGHVTKEGALAGPRVLEHMVDTV
LYFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTEKGLKGVANPSAIFLSQHSEPVPGSCV
LVTLEGTRPMLVEIQALVDGGGPSPRRLSVGLERDRLAMLLAVLHRHAGVACADQDVFVN
AVGGVRISEPAADLAVMLAITSSLRGKALPKGFIAFGEVGLAGEVRPAPRGQERLKEAAK
LGFTVAVVPKANAPKKPIAGLEIHAVERVDEAMTAVRGLD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagaaaaaaccatcttctcctgcaccgaatgcggtggcaccagtccgcgctgg
ctgggcaaatgcccctcctgcggtgcgtggaacaccctgatcgaatccgtgcccgacgcc
ggaccgggcaagaaccgcctgagcggggccggccagtacgcgggcctggcccaggcgcag
gcggtgatgccgctggccgccatcgaggcgaccgaggtggcgcgcactgcgagcggcatc
gaggaactggaccgcgtgctgggcggtggcgtggtcgagggcggagtggtgctcatcggc
ggcgatccgggcatcggcaagtccacgctgctcttgcaggcgatggacgcgctgcagcgc
gcgggcctgcccacgctgtacgtgacgggcgaggagagcggcgcccaggtggcgttgcgt
tcgcgccggctggggctggatgcgagccaggtgaacgtgttggccgagatccaactcgaa
aaaatcctcgccaccgtggaggccacgcagcccgcggtgtgcgtcatcgactccatccag
accgtctattccgaccagctcaccagcgcccccggctcggtggcccaggtgcgcgagtgc
gcggcccacctcacgcgcatggccaaggccacgggcatcgccgtcatcctggtgggccac
gtgaccaaggagggtgcgctggccggcccgcgcgtgctggagcacatggtggacacggtg
ctgtacttcgagggagacacgcacagcagcttccgtctggtgcgcgccatcaagaaccgc
tttggcgccgtgaacgagatcggcgtgttcgccatgaccgagaagggcctcaagggcgtg
gcgaaccccagtgccattttcttgagccagcacagcgagccggtgcccggcagctgtgtg
ctggtcacgctggagggcacgcggccgatgctggtggagatccaggcgctggtcgacggc
ggcggccccagcccacggcgcctgtcggtggggctggagcgcgaccgcctggccatgctg
ctggccgtgctgcaccgccacgcgggcgtggcctgcgccgaccaggacgtattcgtcaat
gccgtagggggcgtgcgcatcagcgaacccgcggccgacctggccgtgatgctggccatc
accagcagcctgcgcggcaaggcgttgcccaagggcttcatcgcgtttggcgaggtgggc
ctggctggcgaggtgcgccccgcgccgcgtggccaggagcgcctgaaggaagccgccaag
ctgggcttcacggtggccgtggtgcccaaagccaatgcgcccaagaagccgatcgccggg
ctggagatccacgcagtggagcgcgtggacgaggccatgactgccgtgcgcgggctggac
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