Diaphorobacter sp. JS3050: HND92_05230
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Entry
HND92_05230 CDS
T10221
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HND92_05230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dij03019
]
HND92_05230
Messenger RNA biogenesis [BR:
dij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HND92_05230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Pep_M12B_propep
Motif
Other DBs
NCBI-ProteinID:
QJY32458
LinkDB
All DBs
Position
complement(1056150..1056839)
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AA seq
229 aa
AA seq
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MLDRDGFRPNVGIILLNQRNQVFWGKRIRTHSWQFPQGGIDRGETPEQAMFRELHEEVGL
LPPQVRVIARTRDWLRYEVPDRFIRRDARGHYKGQKQIWYLLQLLGHDWDLNLRATNHPE
FDAWRWNDYWVPLDVVVEFKRGVYEMALTELARFLPRHEQRNRYLRSGMRTREHESSGQA
SLPRTSSLLVKPGMELPPGASFDPDPQNSVPAPLEALPTLPVPKKPLDA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgggacggattccgcccaaatgtcggcatcatcctgctcaaccagagaaac
caggtattctggggcaagcgcatacgcacccatagctggcagttccctcaaggcggcatc
gaccgcggagaaacccccgagcaggccatgttccgggaactgcacgaagaggtaggactg
ctgccgccccaggtgcgtgtgattgcccgtacgcgggactggttgcgctacgaggtgcca
gaccggttcatccgccgcgatgcacgcggacactacaagggtcagaaacagatctggtac
ctgctgcaattgctggggcacgattgggacctgaacctgcgcgccaccaaccatccagag
ttcgatgcctggcgctggaacgactactgggttccgctggacgtggtggtcgagttcaag
cgaggcgtatatgagatggcgctgactgaactggcgcgttttctgccgcgccatgaacag
cgcaaccgctatttgcgcagcggcatgcgtacgcgcgagcacgagagcagcggccaagcc
tcgctgccccgtaccagttcactgttggtcaagcccggtatggaactgcctccgggcgcc
agcttcgaccctgacccgcaaaacagcgtgccagcgccgttggaggcgctgcctaccctg
cccgtccccaagaaaccactggacgcctag
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