Diaphorobacter sp. JS3050: HND92_05510
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Entry
HND92_05510 CDS
T10221
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HND92_05510 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dij03400
]
HND92_05510 (mutM)
Enzymes [BR:
dij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HND92_05510 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HND92_05510 (mutM)
DNA repair and recombination proteins [BR:
dij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HND92_05510 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
RNHCP
Zn_ribbon_6
NFACT_N
DZR
Zn_ribbon_8
Auto_anti-p27
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
QJY32507
UniProt:
A0A6M6IEL5
LinkDB
All DBs
Position
1113470..1114285
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AA seq
271 aa
AA seq
DB search
MPELPEVEVTRRSFAGAIEGATVRGITVGKPLRWPLGTEPAVLVGRRVCGVRRRGKYLLL
DLDEGLLLIHLGMSGSLRFARDLPARGAHDHFELITDQGTLRLHDPRRFGAVVWAAGESD
PRARKLLDGWGLEPLGEDFAFESFHAGLRAKRSPIKQLLLAGTVVVGVGNIYACEVLFLA
GIRPTTRACAIGPQRARRLHGAIREVLARAVERGGSTLRDFSSADGSAGHFQLEANVYGR
AGLPCRQCGTPVRLLRQGQRSTYFCPHCQRA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgccggaggtggaagtcacgaggcgcagcttcgcgggcgcgatcgagggc
gcaactgtccgcggcattacggtgggcaagcccttgcgctggccgctgggcacggagccc
gcagtattggtcggacggcgggtgtgcggtgtgcgccggcgcggcaaatacctgttgctg
gatctggatgaagggctgctgctcattcacctgggcatgtcgggcagcttgcgctttgca
cgcgatctgcccgcgcgcggcgcccacgaccatttcgaactgataacggaccagggcacg
ctgcggctgcacgacccgcggcgcttcggcgccgtggtctgggcggcgggtgagtccgat
ccccgtgcacgcaagctgctcgatgggtggggattggagccgctgggcgaggacttcgcc
ttcgagtccttccacgcggggctgcgcgccaaacgctcgcccatcaagcaactgctgctc
gcgggcacggtggtcgtgggcgtgggcaatatctatgcctgcgaggtgctgttcctcgca
ggcatccggccaaccacccgcgcttgcgcgatcggaccccagcgagcccggcgcctgcac
ggcgcaatccgcgaggtgctggcgcgcgcggtggagcggggcggcagcacgctgcgtgat
ttctccagcgccgacggcagcgccgggcatttccaattggaggccaatgtctatggccgc
gcgggcctgccgtgtcgccagtgcggcacgcccgtgcgtctgttgcgccaggggcagcgc
agcacctatttctgtccgcactgccagcgcgcctga
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