Diaphorobacter sp. JS3050: HND92_07325
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Entry
HND92_07325 CDS
T10221
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dij Diaphorobacter sp. JS3050
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dij03016
]
HND92_07325 (truB)
Enzymes [BR:
dij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HND92_07325 (truB)
Transfer RNA biogenesis [BR:
dij03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HND92_07325 (truB)
Prokaryotic type
HND92_07325 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QJY32819
LinkDB
All DBs
Position
1489663..1490664
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AA seq
333 aa
AA seq
DB search
MTERAPRIRVQRRPVHGVLLLDKPLGLSSNDALQKVKWLLRAEKAGHTGTLDPLASGVLP
LCFGAATKFSQLQLEAPKTYEAVALLGTTTTTGDAEGQVLAQCAVDPAMLTPERLAAVQA
QFTGPIRQVPPMHSALKKDGKALYEYARAGIAVEREARDVTIHALKLALTHTEQAQPAIK
IVVTCSKGTYIRTLGEDIGQALGCGAHLTFLRRIDTGGIGVERCVTLEALQAMDEDARMA
CVHPVETLLAQHTAVTLDDDNAGRFLSGMRRRGPWPDAPAVAVFGARPRVLLGVGHVRGG
ELIPDRLLSPLEIQQILESSPRAERGTLEATTL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgcgctccccgcatccgggtgcagcggcgcccggtgcacggagtgctgctg
ctcgacaaacccctgggcctgtccagcaatgacgccttgcagaaggtgaagtggctgctg
cgcgccgagaaggctggccacacgggcacgctggacccgctggccagtggtgtgctgccg
ctgtgctttggtgccgccaccaagttcagccagttgcagctggaagcgcccaagacctat
gaagccgtcgcactgttgggtaccaccacaaccaccggtgacgccgagggtcaggtgctg
gcgcagtgcgcggtcgatccggccatgctcacacccgagcggctggcggcggtacaggcg
cagttcactggccccatccgccaggtgccgcccatgcacagcgcgctcaagaaagacggc
aaggcgctgtacgagtacgcgcgtgccggcattgccgtggagcgcgaggcgcgtgatgtc
acgatccatgcattgaaactggcgctaacgcatacggagcaagcgcaaccagctattaaa
atagtagtgacctgcagcaaaggtacctacatccgcaccctgggcgaagacatcggccag
gcgctgggctgcggcgcgcatctcacgttcctgcgccgtatcgacacgggcggtatcggc
gtggagcgatgcgtgacgctggaggcgctgcaggccatggacgaggatgcgcgcatggcc
tgcgtgcacccggtggagaccttgctggcgcagcacacggctgtcacgctggacgatgac
aatgccgggcgtttcctctcgggcatgcgccggcgcggcccctggcccgacgcgcccgcc
gtggccgtgttcggggcgcgcccgcgcgtgctgctgggggtcgggcatgtgcggggagga
gagctgattccagaccggctgctcagcccccttgaaattcaacagattctggagagctcg
ccgcgggctgaacgcggcacattggaagcaactacgctatga
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