Diaphorobacter sp. JS3050: HND92_08320
Help
Entry
HND92_08320 CDS
T10221
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
dij Diaphorobacter sp. JS3050
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dij03400
]
HND92_08320
Enzymes [BR:
dij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HND92_08320
DNA repair and recombination proteins [BR:
dij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
HND92_08320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
QJY32990
LinkDB
All DBs
Position
1697267..1700572
Genome browser
AA seq
1101 aa
AA seq
DB search
MSEAAAQAAYEHNGQPVTREAFYAIACDPQRSVAVEACAGAGKTWMLVSRMLRALLDGCA
PHEILAITFTKKAAGEMRQRLQEWLQEFAAKPLPDLEKELIARGIGPQRALDKREQLQKL
YRQTLDAGRPVQIRTFHSWFAALLGTAPLAVLEQQGLPAHYDLLEDDAEAVREVWRPYLA
AVAQDAALRADYEACVAHHGRSQTHKALEGALAKRVEFALADEAGVVDASIPHFGTQFAD
LAGLHHPADALASDAARQRWHAWAQVLGAQANKTPQKAANAVIDAWLCDDLGQRLDTLRK
AFFVASEDRLSKNLEKFAAAQEAEGELQRLCAARRQHEAWLHQQRMARLARALIAQFAQL
KRERGWVDMNDVERTALVMLSDPILSGWVQERLDARVRHLLVDEFQDTNPLQWQALHAWL
AGYAGAGGGQQPPSVFIVGDPKQSIYRFRRAEPQVFKAAQAFVREGLGGDLLACDHTRRN
AIGVIAAVNQAMQAAQAQGEYAGFRDHTTESRDPGQLLRLPPITAPDGGDAAAATAPEWR
DTLTQPRHEAEETLRMRECAQAAQWVAAQIAAGVQPQEIMVLARKRDRLASLQEALRALH
VPCVQPEKAELGEAPEVQDIVALLDALVSPGHDLSLARALRSPLFGLTDDALVQIALRVR
QTAAEGSPCSWFDVLQKSELLPPDLQALAPVLAQYKRWVETRPPHDALHAIYEHGDVPAR
FAAAAPASQRAGVLANLRALLAAALQQDGGRYLTAYAFVRAMKRPGMRAPGRVEAQAVRL
LTIHGAKGLEAHSVLLLDTDARAQKAETMGALVDWPGEQAAPLRFVFLASESNPPPSAVD
LLAAELAERQREELNTLYVAMTRAKHCLALSAVQSSTAAPGSWWNRLAESLQDAPVPPAA
PLGDVADDAAVALPQLPPYAGAAPGAQAAAAGAPASTPQSRQGEAMHQLLEQAGVVGALR
AGGVWPARRLAQLARDFDITTEAAAQAAAMARSILQGEGAWAWNPDHVEQALNEAPLVYQ
GQGLRLDRLVRLRQPREGARWWVLDYKSATAPERQPQLMAQLRLYREAVGAQFPGERVGA
AFLTGDGRLVVVDAPGQGVLF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagctgccgcgcaagccgcctacgaacacaacggccaaccggtcacgcgggag
gccttctatgccatcgcctgcgacccgcagcgcagcgtggccgtggaggcctgcgccggc
gccggcaagacctggatgctggtctcgcgcatgctgcgcgcgctgctggacggctgtgcg
ccgcacgagatcctggccatcaccttcaccaagaaggccgcgggcgaaatgcgccagcgc
ctgcaggaatggctgcaggagtttgcggccaagccgctgcctgatctggaaaaggagctg
attgcaagaggaatcgggccgcagcgcgctctggacaagcgcgagcagctacaaaaacta
taccggcagacgctggacgcgggccgccccgtgcagatacgcacctttcacagctggttt
gcggcgctgctgggcacggcgccgctggcggtgctggagcagcagggcctgcccgcccat
tacgacttgctggaggatgacgccgaggcagtgcgcgaggtctggcgcccctacctcgcc
gccgtggcgcaggacgccgcgctgcgcgcggattacgaagcctgcgtggcgcatcacggc
cgctcgcagacgcacaaggcgcttgaaggcgcgctggccaagcgcgtggagttcgcgctg
gccgacgaggcgggcgtggtggacgcatcgatcccgcatttcggcacgcagttcgcggac
cttgccggcttgcaccatccggccgatgcgctggccagcgacgcagcgcgccagcgctgg
catgcctgggcccaggtgctgggggcgcaggcgaacaagacgccgcagaaggccgccaac
gcggtgatcgacgcctggctgtgcgacgacctgggccagcgtctggacacgctgcgcaag
gccttcttcgtggccagcgaggatcgcctgtccaagaatctggagaagttcgccgccgcg
caggaggccgagggcgaactgcagcgcctgtgcgccgcgcgccgccagcacgaggcctgg
ctgcaccagcagcgcatggcgcggctggcgcgcgcgctcatcgcgcagttcgcccagctc
aagcgcgagcgcggctgggtggacatgaacgacgtggagcgcacggcgctggtcatgctg
tccgaccccatcctttcgggctgggtgcaggagcgcctggacgcgcgcgtgcgccacctg
ctggtggatgagttccaggacaccaacccgctgcagtggcaggcgctgcatgcctggctg
gccggttacgcgggcgcgggcggcggccagcagccgcccagcgtgttcatcgtgggtgac
cccaagcagagcatctaccgctttcgccgcgccgagccgcaggtcttcaaggccgcccag
gccttcgtacgcgaggggctggggggcgacctgctggcctgcgaccacacgcggcgcaac
gccatcggcgtgatcgcagcggtgaaccaggccatgcaggcggcgcaggcgcagggcgag
tacgcgggctttcgcgaccacaccaccgaatcgcgcgacccggggcaactgctgcgcctg
cccccgatcacggcgcctgacgggggtgatgccgccgcggccactgcccccgagtggcgc
gacactctgacccagccgcgccatgaagccgaggaaaccctgcgcatgcgcgaatgcgcg
caggctgcgcaatgggtggcggcgcagatcgccgcgggcgtgcagccgcaggagatcatg
gtgctcgcgcgcaagcgcgaccggctggcctccctgcaggaggccctgcgcgcgctgcac
gtgccctgcgtgcagcccgagaaggccgagctgggcgaggcgcccgaggtgcaggacatc
gtcgcgctgctggatgccctggtctcaccggggcatgacctttcgctggcgcgtgcgctg
cgctcgccgctgttcggcctgacggatgacgcgctggtgcagattgcgctgcgggtacgc
cagacggccgcagaaggatccccgtgcagctggttcgacgtacttcaaaaaagtgagctg
cttccgcccgacctgcaagcgctggcgcctgttttggctcaatacaagcgatgggtggaa
acacgccccccccacgatgcgctgcatgccatctacgaacacggcgacgtgcccgcgcgc
tttgccgccgcggctcccgcctcgcagcgtgcgggcgtgctggccaacctgcgcgctttg
ctggccgcggcgctgcagcaggacggggggcgctacctcacggcctatgccttcgtgcgc
gccatgaagcgcccgggcatgcgcgcacccggccgcgtggaggcgcaggccgtgcgcctg
ctcaccatccacggcgccaaagggctggaggcgcacagcgtgctgctgctggacaccgat
gcgcgcgcgcagaaggccgagaccatgggcgcgctggtcgactggccgggcgagcaggcc
gctccgctgcgctttgtctttctggccagcgaatccaacccgccgcccagtgcggtggac
ctgctggcggcggaactggcggagcgccagcgcgaggagctcaacaccctctatgtggcc
atgacacgcgccaagcattgcctggccttgtcggcggtgcagtccagcacggccgcgccc
ggcagttggtggaaccggctggccgagtccctgcaggacgcgccagtgccgcccgccgcg
ccattgggcgatgtggctgacgatgccgccgtcgcgttgccgcagcttccgccgtatgcg
ggggctgcgccgggggcacaagccgctgcggcgggtgctcccgcctccaccccgcagtcg
cgccagggcgaggccatgcaccagttgctggagcaggcgggcgtggtcggcgccctgcgg
gcgggcggcgtgtggcccgcgcggcggctggcgcagctggcgcgcgatttcgatatcacg
acggaggctgccgcacaggccgcagcgatggcgcggagcattctgcagggcgagggtgcc
tgggcgtggaaccccgatcacgtggagcaggccctcaacgaagcgccgctggtctaccag
ggccagggtctgcgtctggaccgcctggtgcggctgcgccagccgcgcgagggtgcgcgc
tggtgggtgcttgactacaaaagtgccaccgcgcccgagcgccagccgcagctgatggcc
caactgcgcctgtaccgcgaagcggtgggagcgcagtttccgggcgagcgggtgggcgcg
gctttcttgacgggcgatgggaggctggtggtcgtggacgcgccagggcagggcgtgctg
ttctga
DBGET
integrated database retrieval system
