KEGG   Diaphorobacter sp. JS3050: HND92_09110
Entry
HND92_09110       CDS       T10221                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
dij  Diaphorobacter sp. JS3050
Pathway
dij00010  Glycolysis / Gluconeogenesis
dij00020  Citrate cycle (TCA cycle)
dij00260  Glycine, serine and threonine metabolism
dij00280  Valine, leucine and isoleucine degradation
dij00310  Lysine degradation
dij00380  Tryptophan metabolism
dij00620  Pyruvate metabolism
dij00630  Glyoxylate and dicarboxylate metabolism
dij00640  Propanoate metabolism
dij00670  One carbon pool by folate
dij00785  Lipoic acid metabolism
dij01100  Metabolic pathways
dij01110  Biosynthesis of secondary metabolites
dij01120  Microbial metabolism in diverse environments
dij01200  Carbon metabolism
dij01210  2-Oxocarboxylic acid metabolism
dij01240  Biosynthesis of cofactors
Module
dij_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dij_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dij_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
dij_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:dij00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HND92_09110 (lpdA)
   00020 Citrate cycle (TCA cycle)
    HND92_09110 (lpdA)
   00620 Pyruvate metabolism
    HND92_09110 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    HND92_09110 (lpdA)
   00640 Propanoate metabolism
    HND92_09110 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HND92_09110 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    HND92_09110 (lpdA)
   00310 Lysine degradation
    HND92_09110 (lpdA)
   00380 Tryptophan metabolism
    HND92_09110 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HND92_09110 (lpdA)
   00670 One carbon pool by folate
    HND92_09110 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dij04147]
    HND92_09110 (lpdA)
Enzymes [BR:dij01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HND92_09110 (lpdA)
Exosome [BR:dij04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HND92_09110 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA FAD_binding_2 Biotin_lipoyl_2 Thi4 AlaDh_PNT_C NAD_binding_8 DEC-1_N FAD_binding_3 DAO HI0933_like GCV_H HlyD_D23 DUF2486 Lycopene_cycl
Other DBs
NCBI-ProteinID: QJY33129
UniProt: A0A6M6I5J5
LinkDB
Position
1866114..1867997
AA seq 627 aa
MAIIDIKVPDIGDFAEVGVIEVLVQPGDTIRAEQSLVTVESDKASMEIPSSHAGVVKELK
VKLGDKVAEGSVLLTLEVAQGAAAPAAAPAAASTPSAPPSESKPAPAPAVQAPAAPKTEA
ASFGGSADVECDVLVLGGGPGGYSAAFRAADLGLNVVLVERYATLGGVCLNVGCIPSKAL
LHVAAVMDEVSHLKSAGIDFGAPQVNIDTLRGHKEKVIGKLTGGLAQMAKMRKVTVLRGY
GHFVGANHLEVEETTGTSQDKTGAKKVVAFKRAIIAAGSQAVRLPFMPDDPRVVDSTGAL
ALQGVPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKVWQKMNQHR
FDNVMLNTKTVAAEATPEGIKVSFAPAKDGVTVPEPQVYDLVLQAVGRTPNGKKIAADKA
GVAVTDRGFINVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGELQGNKEL
ASAAFNARVIPSVAYTDPEVAWVGLTEDQAKQQGIKVKKGLFPWAASGRAIANGRDEGFT
KLLFDDSPEAGSGDGHAGRGHGKILGGGIVGTHAGDMIGEIALAIEMGADAVDIGKTIHP
HPTLGESIGMAAEIAHGSCTDVPPARK
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggcaatcatcgacatcaaggtgcccgacatcggcgacttcgccgaggtgggcgtgatc
gaagtgctggtgcagccgggcgacaccatccgggccgagcagagcctggtcaccgtggag
tccgacaaggcctccatggagattcccagcagccacgccggcgtggtcaaggagctcaag
gtcaagctgggcgacaaggtggccgagggttccgtgctgctgacgctggaagtggcgcag
ggagcggcggcgccggctgcggcccctgccgcggcgagcacgcccagcgcaccgccatct
gagtcaaaaccggctccagcgcccgctgttcaagcgccagcagctcctaaaaccgaagcg
gccagcttcggcggcagtgccgacgtggagtgcgatgtgctggtgctgggtggcggcccc
ggcggttacagcgccgccttccgcgcggccgacctgggcctgaacgtggtgctggtcgag
cgctacgccaccctgggcggcgtgtgcctgaacgtgggctgcattccctccaaggcgctg
ctgcacgtggccgcggtgatggacgaggtgagccacctgaagagcgccggcatcgacttc
ggcgcgccgcaggtcaacatcgacaccctgcgcggccacaaggaaaaggtcatcggcaag
ctgaccggcgggctggcgcagatggccaagatgcgcaaggtgaccgtgctgcgcggctac
ggccacttcgtcggcgccaaccacctggaggtggaggaaaccaccggcaccagccaggac
aagaccggcgccaagaaggtggtggcgttcaagcgcgccatcatcgccgccggcagccag
gccgtgcgcctgccgttcatgcccgacgatccgcgcgtggtggattccaccggcgcgctg
gcgctgcagggcgtgcccaaacgcatgctgattctgggcggcggcatcatcggcctggaa
atgggcacggtgtacagcacgctgggcgcgcgcctggacgtggtggagatgctggacggc
ctgatgcagggcgctgatcgcgacctggtcaaggtatggcagaagatgaaccagcaccgt
ttcgacaacgtgatgctgaataccaagaccgtggccgccgaggccacgcccgaaggtatc
aaggtgagcttcgcgcccgccaaggacggcgtcacggtgcccgagccccaggtgtacgac
ctggtgctgcaggccgtgggccgcacccccaacggcaagaagatcgccgccgacaaggcc
ggcgtcgccgtgacggaccgcggcttcatcaacgtcgacatccagatgcgcaccaacgtg
ccgcacatcttcgccatcggcgacatcgtgggccagcccatgctggcgcacaaggcggtg
cacgaggcgcacgtggcggccgaggtcatcgccggcgaactgcagggcaacaaggaactg
gcaagcgccgccttcaacgcccgcgtgatcccgagcgtggcctataccgaccccgaagtg
gcctgggtgggtctgaccgaggaccaggccaagcagcagggcatcaaggtcaagaagggc
ctgttcccctgggcggccagcggccgcgccatcgccaacggccgtgacgagggctttacc
aagctgctgttcgacgacagccccgaggcaggatcaggagacggccatgctggccggggc
cacggcaagatcctgggcggcggcatcgtcggcacgcacgccggcgacatgatcggcgag
atcgccctggccatcgagatgggcgccgacgcggtggacatcggcaagaccatccacccg
catccgacgctgggcgagagcatcggcatggcggcggagattgcccacggcagttgcacg
gatgtgccgcctgcgcgcaagtaa

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