Diaphorobacter sp. JS3050: HND92_09560
Help
Entry
HND92_09560 CDS
T10221
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HND92_09560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dij03000
]
HND92_09560
03400 DNA repair and recombination proteins [BR:
dij03400
]
HND92_09560
Enzymes [BR:
dij01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HND92_09560
Transcription factors [BR:
dij03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HND92_09560
DNA repair and recombination proteins [BR:
dij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HND92_09560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
HHH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QJY33207
LinkDB
All DBs
Position
1973982..1975535
Genome browser
AA seq
517 aa
AA seq
DB search
MPDVLHSPAPPASAASAADDDQARYLALRARDARFDGRFFTGVTSTGIYCRPVCAVRTPR
RENCRFFTLAAQAESAGFRPCLRCRPELAPQALAWSVQDASGILVRQALRMLDAPQSWGA
CEGGAVVAQLAARLGVSDRHLRRIFEAALGISPLQYLQTRRLLAAKQLLTDTDLPVTQVA
LASGFASVRRFNAAFNTHYGLNPTQLRRQGAAPDGVQAGARAVRLGLRPPYDTAALMGFL
AARQIHGMESIRTGPGAQVLRRTVRLASAGTVFTGWLEAGFDDGRPQLWLRVSDGLQPVL
PQLIARVRALFDLDADPQAINAVLHPSFPEGDGLRVPGAFDGFELAVRAVLGQQITVAAA
RTLAQRLVERFGEPIATPWPDLHRLFPTPAALAAAQGDALGSLGIVRQRQAAIVALAQAV
DAGTLLLDASADVPATLDALRALPGIGDWTAQYIAMRALRWPDAFPAGDVALHKALGVQG
QPQPARAATEAARAWRPWRSYGVLRSWSGLALALSDQ
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgttcttcattcccctgctccacccgccagcgccgcctctgcggccgacgac
gaccaggcccgctacctggccctgcgggcccgggatgcgcgttttgacggacggttcttc
accggcgtgacctccaccggcatctattgccgccccgtctgtgccgtacgcacgccccgg
cgcgaaaactgccgtttttttacgctggcggcgcaggccgagagtgccggctttcgcccc
tgcctgcgctgccggcccgagctggcgccgcaggcgctggcctggtcggtgcaggacgca
tcgggcatcctcgtgcgccaggcgctgcggatgctggatgcgccgcagtcctggggcgcg
tgcgaaggcggcgccgtggtcgcgcagctggctgcgcgcctgggcgtgagcgaccggcac
ctgcgccgcatcttcgaggccgcgctgggcatctcgccgctgcagtacctgcagacgcgc
cggctgctggcggccaagcagttgctgaccgataccgatctgcccgtcacccaggtggcg
ctggccagcggctttgccagcgtgcgccgcttcaacgcggccttcaatacccactacgga
ctcaatcccacccagttgcgccggcaaggcgccgcacccgatggggtacaggcaggcgcc
cgtgcggtgcgtctgggcctgcgcccgccctacgacacggccgcgctgatgggctttctg
gcggcgcggcagattcacggcatggagagcatccgcaccgggccgggggcgcaggttctg
cgcagaacggtgcggctggcaagcgcgggcaccgttttcaccggctggctggaagccggc
ttcgatgacgggcgcccccagctgtggctgcgcgtcagcgacggcctgcagcccgtgctg
ccgcagctcatcgcgcgggtgcgcgcattgttcgacctggacgcggacccgcaggccatc
aacgcggtgctgcacccctccttcccggagggcgacggcctgcgtgtgccgggcgcgttc
gacggcttcgagctggcggtgcgcgccgtgctgggccagcagatcacggtggccgccgcg
cgcacgctggcgcagcggctggtggaacgctttggcgagcccatcgccacgccatggccg
gacctgcatcggctgtttcccacaccggccgctctggccgcggcgcagggggacgcactg
ggcagcctgggcatcgtgcgccagcggcaggccgccatcgtggcgcttgcgcaggccgtg
gacgcgggcacgctgctgctggacgccagcgccgacgtacccgccacgctggacgcgctg
cgtgcgctgcccggtattggcgactggacggcgcagtacatcgccatgcgcgccctgcgc
tggcccgacgcctttccggccggagacgtggcgctgcacaaggcgctgggcgtgcagggc
cagccgcaacccgcgcgcgccgccaccgaagcagcccgcgcctggcgcccctggcgcagc
tatggcgtgctgcgctcgtggagtggtttggctctggcgctatcagaccaatag
DBGET
integrated database retrieval system
