Diaphorobacter sp. JS3050: HND92_10310
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Entry
HND92_10310 CDS
T10221
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij00540
Lipopolysaccharide biosynthesis
dij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HND92_10310
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dij01005
]
HND92_10310
Lipopolysaccharide biosynthesis proteins [BR:
dij01005
]
Lipid A
HND92_10310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
QJY33318
UniProt:
A0A6M6II17
LinkDB
All DBs
Position
complement(2125509..2126708)
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AA seq
399 aa
AA seq
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MIGIGGYRWSLRGTKVRQPMQCVILLIAGALFSPISAFGSEVSLSANPPSCSPEQSLRWR
GGTLRLENDLFTGSDRNYTNGVALTAVSRDLQGGLRPECLPQPIGLYARFIGWADPGFWR
DSGAQTSSQNLVVRFGQSMYTPENKTRTDVIPDDRPYAGLLYLGLAWNRRIHPQAASYEM
LDVRELTLGVIGPWSLAEQSQDLVHRARGIERFRGWDNQLRNEPAFQMAMERKFKPYTEG
AVRPGWGSDVIGSYALRVGNIETAASTGVEFRAGWNIPNDFGSYPIRPGAENRPPSGVAD
LRTKTPQSVLAPKPGAHVFLNLEGKAVAWDFSLDGNMFRHSHHVSRRPWIAQAALGISSQ
WIVAGRGVRLAVMRVWRTREFDQQAGHHAFGSIALSLEF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgattggcatcggcgggtatcgctggagcctgcgcggcaccaaggtgcggcagccgatg
cagtgcgtcatcttgttgattgcgggtgcattgttcagcccgatttctgcttttggttcc
gaagtctcactctctgcaaatcctccctcctgctcgccagagcaatccctgcgctggcgg
ggcggcaccctgcgtctggagaacgatttgttcaccggctccgatcgcaactacaccaac
ggtgtcgcgctaacagcagtctcacgtgatctgcaaggcgggctccgtccggagtgcctg
cctcagccgattggtttgtacgcccgcttcatcggctgggctgatcccgggttctggcgc
gattccggcgcccagacatcgtcgcaaaacctcgtcgtgcgctttggccagtccatgtac
acgcccgagaacaagacgcgcaccgacgtgattccagatgaccgaccgtacgctggtttg
ctctacctgggtttggcgtggaatcgccgcatccacccacaagccgccagctacgaaatg
cttgacgtgcgtgagctgaccctgggcgtgatcggcccctggtcgctggccgagcaatct
caggatctggtgcatcgggcacgcggcattgagcgatttcgcggctgggacaaccagttg
cgcaacgagccggcgtttcagatggccatggagcgcaagttcaagccgtacacggagggt
gcggtccgccctggatggggcagcgacgtgatcggcagctatgccctgcgggtcggaaac
atcgaaaccgccgccagtaccggcgtggagtttcgcgcgggctggaacataccgaacgac
ttcggcagctatccgatccgccctggcgcagagaaccgcccgccctctggtgttgccgat
ctgcgcacgaaaacgccgcagtcggtcctggcgcccaaacctggggcacatgtcttcctg
aatctggagggtaaagccgtcgcctgggacttctcactcgacggaaacatgttccggcat
agccatcacgtcagccggcggccttggatcgcgcaagcagctctcggcatcagtagccaa
tggatcgttgctggacgtggcgtacggctcgccgtgatgcgcgtttggagaacccgcgag
ttcgaccagcaggcgggccatcacgcattcggatcgatcgcgctgagtctggaattttga
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