Diaphorobacter sp. JS3050: HND92_13160
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Entry
HND92_13160 CDS
T10221
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HND92_13160 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dij03019
]
HND92_13160 (pcnB)
Enzymes [BR:
dij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HND92_13160 (pcnB)
Messenger RNA biogenesis [BR:
dij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HND92_13160 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QJY33823
UniProt:
A0A6M6IE77
LinkDB
All DBs
Position
complement(2731705..2733300)
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AA seq
531 aa
AA seq
DB search
MIKTFIDKLLGKGAAGAGRGTRGRFGKRAEVPAAVHGINPELVDRRASDVVRTLKQAGYE
AYIVGGAVRDLLLGLKPKDFDVATNATPEQVKGLFRRAFIIGKRFRIVHVVHGRGREHEV
IEVSTFRAYMDNAAAEQVGGNEKTSKAQLAGMHHAVDASGRVLRDNVWGPQDEDATRRDF
TVNAMYYDPETEVVVDFHRGIEDAKKRVLRMIGDPATRYREDPVRIIRAVRFAAKLSPLG
FALEPKTAKPLVECEPLLREVPQSRLFDEMLKLLQTGHALASIAQLKSLGLATGIYPLLD
VVVDRSSHPFVQAALADTDRRVGEGKPVAPSFLLACVLWQDVKAGWEQRLGRQQPFPALQ
DAIDDVFDKRIGDVSGRGKLAADMREIWVMQPRFEKRSGSTPFGMVAHLRFRAGFDFLRL
RADVGEVEEALAEWWQEFSLADDARREDMIEQAREEQRARQRKAQPTVRRVPKAAPVATD
DAEPPRRASDAGDSLAEPAAEDAAAPKKRRRRRRKPTGSGASEGGAPAGEA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaccttcatcgacaaactgctgggcaagggcgccgccggcgcgggccgtggc
acgcgcggccgctttggcaagcgtgcggaagtgcccgccgcggtgcacggcatcaacccc
gaactggtggaccgccgcgccagcgacgtggtgcgcacactcaagcaggcgggctacgag
gcctacatcgtcggcggcgcggtgcgcgacctgctgctgggcctcaagcccaaggacttc
gacgtggccaccaacgccacgcccgagcaggtcaagggcctgttccggcgcgccttcatc
atcggcaagcgctttcgcatcgtgcacgtggtgcacggccgcgggcgcgagcatgaggtg
atcgaggtctccactttccgtgcctacatggacaacgcggcagccgagcaggtggggggc
aacgaaaagaccagcaaggcccagctggccggcatgcaccatgccgtggacgccagcggc
cgcgtgctgcgcgacaacgtctggggcccgcaggacgaggacgccacgcggcgcgacttc
accgtcaacgccatgtactacgacccagagaccgaggttgtggtggacttccacaggggc
atcgaggacgccaagaaacgcgtgctgcgcatgatcggcgacccggccacgcgctaccgc
gaggaccccgtgcgcatcatccgcgccgtgcgctttgcggccaagctcagcccgctgggc
tttgccctggagcccaagaccgccaagcccctggtggagtgcgagccgctgctgcgggag
gtgccgcaaagccgcctgttcgacgagatgctgaagctgctgcagaccggccacgcactg
gcctcgatcgcgcagctcaagtccctggggctggccacgggcatctacccgctgctggac
gtggtggtggaccgttccagccacccgtttgtgcaggccgcgctggccgacaccgaccgc
cgcgtgggcgagggcaaacccgttgcgcccagcttcctgctggcctgtgtgctgtggcag
gacgtgaaggccggctgggagcagcgcctggggcgccagcagccctttccggcgctgcag
gatgcgatcgacgatgtgttcgacaagcgcatcggcgatgtctccggccgcggcaagctg
gcggcggacatgcgcgagatctgggtcatgcagccgcgcttcgagaaacgctcgggcagc
acacccttcggcatggtggcgcacctgcgttttcgcgcaggcttcgacttcctgcgcctg
cgcgcggacgtgggcgaggtggaggaggcgctggccgagtggtggcaggagttctcgctg
gccgacgatgcgcgccgtgaggacatgatcgagcaggcgcgcgaggagcagcgcgcgcgc
cagcgcaaggcccagcccacggtacggcgcgtgcccaaggccgcgccagtcgccacggac
gacgccgagcccccgcgcagggccagcgatgccggtgattccctggccgagccagcggca
gaggacgctgctgcgcccaagaagcgccgccgccgtcgccgcaagcccacgggcagcggt
gcatccgagggtggcgcgcccgcgggcgaggcgtga
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