Diaphorobacter sp. JS3050: HND92_16205
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Entry
HND92_16205 CDS
T10221
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HND92_16205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dij02022
]
HND92_16205
02035 Bacterial motility proteins [BR:
dij02035
]
HND92_16205
Two-component system [BR:
dij02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HND92_16205
Bacterial motility proteins [BR:
dij02035
]
Pilus system
Twitching motility proteins
HND92_16205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
PDE8A_N
HTH_23
HTH_28
AAA
AAA_16
HTH_30
Sigma70_r4
HTH_24
AAA_2
VpsR
Motif
Other DBs
NCBI-ProteinID:
QJY34371
LinkDB
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Position
3379660..3381168
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AA seq
502 aa
AA seq
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MNASTASILVVDDEPDLRTLYELTLLREGYRVETAASVDDARQQLQTQKFDVVITDMRLP
DGFGMDLLHDLRSQQRRERCVVMTAYGSAENAVEALRAGAFDYLTKPVDLKQFRAVVASA
VQGIGAVLAAPKATRPGARNVTQWPDMQDPVLDRLIGDSEAMRNVKQRIAKVARSMAPVL
VRGESGTGKELVARALHASSQRSEGPLIAVNCGAIPENLLEAEFFGARKGSYTGSTHDRE
GYFQAARGGTLFLDEIGDLPLPMQSKLLRAIQERTVRPLGSTQEEAVDVRIVSATHRDLA
ADVQAGRFRQDLYYRLNVIELLIPPLRERREDLPALCEALLARIEQESGVAVPHLTEEAL
QCIAQHPLTGNVRELENLLHRAVALSDGHELHVEGAPASTVEAPPPLPQPVPSAPAIAQP
AEPHAPPRWSGISEGMPLPNDLQAWLDQQEREILVRALREAGFNRTATAARLGISLRQIR
YRIARLHIEVPQDGDSHGDAQP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcatccaccgcctccattcttgtcgttgatgacgaacccgatctgcgcaccctc
tatgagctgaccctgctgcgcgaaggctaccgcgtggagaccgccgccagcgtggacgac
gcgcgccaacagctgcagacgcagaagttcgacgtcgtgatcaccgacatgcggctgccc
gacggcttcggcatggacttgctgcacgacctgcgcagccagcagcggcgtgaacgctgc
gtggtcatgacggcctatggatcggccgagaacgcggtggaggcgctgcgcgcgggcgcg
ttcgactacctgaccaagcccgtggacctgaagcaattccgtgccgtggtggcctcggcg
gtgcagggtattggcgccgtactggcggcgcccaaagccacccgccccggcgcacgcaat
gtcacgcagtggccggacatgcaagatcctgtgctggatcgcctgatcggcgactccgaa
gccatgcgcaatgtgaagcagcgcatcgccaaggtggcgcgcagcatggcccccgtgctg
gtgcgtggcgagtcaggcacgggcaaggaactggtggcccgcgcgctgcatgccagcagc
cagcgctccgaaggcccgctgatcgccgtcaactgcggcgcgattcctgagaacctgctg
gaggcagagttctttggcgcgcgcaagggttcctacaccggctctacgcacgaccgggag
ggctacttccaggccgcccgtggaggcacgctgttccttgacgaaattggcgacctgccg
ctgcccatgcaatccaaactgctgcgtgcgatccaggagcgcacggtacggcccctgggc
tccacgcaggaagaagccgtggacgtgcgcatcgtcagcgccacgcaccgagacctggcc
gccgacgtgcaggcggggcgcttccgccaggatctgtattaccggctgaatgtcatcgaa
ctgctgatcccaccgttgcgcgagcggcgagaggacctgcccgcgctgtgcgaggccttg
ctggcccgtatcgagcaagaatcgggggtggccgttccccacctgacagaggaagcgctg
cagtgcattgcacagcacccgctcaccggcaatgtgcgcgagctggaaaacctgctgcac
cgcgcggtagccctcagcgatggccatgagctgcacgttgaaggcgcgccagcctccaca
gtggaggcaccgccgcccctaccgcagcccgtaccgtccgcaccagccatcgcgcagccc
gctgagccgcacgcgccccctcgttggtccggcatcagcgaaggcatgcccctgcccaac
gatctgcaagcctggctcgaccagcaggaacgggaaatactcgtgcgcgccctgcgcgag
gcgggtttcaaccgcacggccaccgcagcccgcctgggcatcagcctgcgccaaatccgt
taccggattgcccggctgcacatcgaggtaccgcaagacggcgacagccatggcgacgcg
cagccctga
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