Diaphorobacter sp. JS3050: HND92_16530
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Entry
HND92_16530 CDS
T10221
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dij Diaphorobacter sp. JS3050
Pathway
dij00300
Lysine biosynthesis
dij00470
D-Amino acid metabolism
dij01100
Metabolic pathways
dij01110
Biosynthesis of secondary metabolites
dij01120
Microbial metabolism in diverse environments
dij01230
Biosynthesis of amino acids
Module
dij_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dij00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HND92_16530 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HND92_16530 (dapF)
Enzymes [BR:
dij01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HND92_16530 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Phage_tail_terminator_3
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
QJY34432
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Position
complement(3456441..3457319)
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AA seq
292 aa
AA seq
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MHIRFTKMQGAGNDFVVLDETQGRLGLTPAQYRFLADRHFGVGADQILTVRPSPGAGIDF
EYVIHNADGGQVEQCGNGARCFARYVRDKGLTAQDTIRVQTMAGVIAPHLTADGRVTVDM
GRPELEPARVPFDTTGLAPVSQGSGQKWPLALDGQASAATLLVAVVSMGNPHAVQLVDDV
DTAPVAQTGPLIESHPRFPQRVNAGYLQIVNRGEVRLRVYERGAGETLACGTGACAAVVA
GIRLGLLDARVQVHTRGGLLTIDWAGGLQDPVFMTGPATTVFEGEIDIPDAL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcacatccgcttcaccaagatgcagggcgcgggcaacgacttcgtggtactcgacgag
acgcaggggcgcctggggctcacgcccgcgcagtaccgctttctggccgaccgccacttc
ggcgtgggcgccgaccagatcctcaccgtgcgcccctcgcccggcgcgggcatcgacttc
gaatacgtgatccacaacgccgacggcggccaggtggagcagtgcggcaacggcgcgcgc
tgtttcgcgcgctatgtgcgcgacaagggcctcaccgcgcaggacacgatccgcgtgcag
accatggccggcgtcatcgccccgcatctgaccgccgacggccgtgtgacggtggacatg
ggccgccccgagctggagccggcgcgcgtgccgttcgacaccacgggcctcgcgcccgtg
tcgcaaggttcaggccaaaaatggcctctggcgcttgatggacaggcgtcagcagctacg
ctattggtagcagtggtgtccatgggcaacccgcacgccgtccagttggtcgacgatgtg
gacactgcccccgtggcgcagaccggtcccttgatcgaaagccacccgcgctttccccag
cgcgtgaacgcgggctacctgcagatcgtgaaccgtggtgaagtgcgcctgcgcgtgtac
gagcgcggcgcgggcgagacgctggcctgcggcacgggcgcctgcgccgccgtggtggcc
ggcatccgcctggggctgctggatgcgcgcgtgcaggtgcacacgcggggcggcctgctc
accatcgactgggccggcggcttgcaagaccccgtgttcatgaccggccccgctaccacc
gtcttcgaaggcgagatcgacattccggacgctttatga
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